RNA–Protein interactions for RNA: ENST00000290472.3

PLA2G4D-201, Transcript of phospholipase A2 group IVD, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLA2G4D, Length 3,584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLA2G4D-201ENST00000290472 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
PLA2G4D-201ENST00000290472 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
PLA2G4D-201ENST00000290472 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
PLA2G4D-201ENST00000290472 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
PLA2G4D-201ENST00000290472 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.45
PLA2G4D-201ENST00000290472 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
PLA2G4D-201ENST00000290472 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
PLA2G4D-201ENST00000290472 HRCP23327 699 aa17.61■□□□□ 0.41
PLA2G4D-201ENST00000290472 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
PLA2G4D-201ENST00000290472 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
PLA2G4D-201ENST00000290472 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
PLA2G4D-201ENST00000290472 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.35
PLA2G4D-201ENST00000290472 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
PLA2G4D-201ENST00000290472 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
PLA2G4D-201ENST00000290472 ABCC9O60706 1549 aa17.03■□□□□ 0.32
PLA2G4D-201ENST00000290472 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
PLA2G4D-201ENST00000290472 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
PLA2G4D-201ENST00000290472 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
PLA2G4D-201ENST00000290472 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.27
PLA2G4D-201ENST00000290472 SCRIBQ14160 1630 aa16.75■□□□□ 0.27
PLA2G4D-201ENST00000290472 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
PLA2G4D-201ENST00000290472 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.26
PLA2G4D-201ENST00000290472 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
PLA2G4D-201ENST00000290472 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.25
PLA2G4D-201ENST00000290472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
PLA2G4D-201ENST00000290472 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
PLA2G4D-201ENST00000290472 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
PLA2G4D-201ENST00000290472 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
PLA2G4D-201ENST00000290472 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
PLA2G4D-201ENST00000290472 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
PLA2G4D-201ENST00000290472 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.22
PLA2G4D-201ENST00000290472 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
PLA2G4D-201ENST00000290472 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
PLA2G4D-201ENST00000290472 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
PLA2G4D-201ENST00000290472 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
PLA2G4D-201ENST00000290472 NACADO15069 1562 aa16.31■□□□□ 0.2
PLA2G4D-201ENST00000290472 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
PLA2G4D-201ENST00000290472 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
PLA2G4D-201ENST00000290472 WIZO95785 1651 aa16.06■□□□□ 0.16
PLA2G4D-201ENST00000290472 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
PLA2G4D-201ENST00000290472 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.15
PLA2G4D-201ENST00000290472 MYT1Q01538 1121 aa16.01■□□□□ 0.15
PLA2G4D-201ENST00000290472 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
PLA2G4D-201ENST00000290472 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
PLA2G4D-201ENST00000290472 MIER1Q8N108 512 aa15.88■□□□□ 0.13
PLA2G4D-201ENST00000290472 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
PLA2G4D-201ENST00000290472 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
PLA2G4D-201ENST00000290472 APLP2Q06481 763 aa15.81■□□□□ 0.12
PLA2G4D-201ENST00000290472 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
PLA2G4D-201ENST00000290472 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
PLA2G4D-201ENST00000290472 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
PLA2G4D-201ENST00000290472 BCANQ96GW7 911 aa15.76■□□□□ 0.11
PLA2G4D-201ENST00000290472 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
PLA2G4D-201ENST00000290472 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
PLA2G4D-201ENST00000290472 SOGA1O94964 1423 aa15.68■□□□□ 0.1
PLA2G4D-201ENST00000290472 ITGAEP38570 1179 aa15.67■□□□□ 0.1
PLA2G4D-201ENST00000290472 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
PLA2G4D-201ENST00000290472 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
PLA2G4D-201ENST00000290472 WRNQ14191 1432 aaPredicted RBP eCLIP15.65■□□□□ 0.1
PLA2G4D-201ENST00000290472 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
PLA2G4D-201ENST00000290472 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
PLA2G4D-201ENST00000290472 EEA1Q15075 1411 aa15.64■□□□□ 0.09
PLA2G4D-201ENST00000290472 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
PLA2G4D-201ENST00000290472 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
PLA2G4D-201ENST00000290472 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
PLA2G4D-201ENST00000290472 GOLGA3Q08378 1498 aa15.52■□□□□ 0.07
PLA2G4D-201ENST00000290472 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
PLA2G4D-201ENST00000290472 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
PLA2G4D-201ENST00000290472 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
PLA2G4D-201ENST00000290472 NEFLP07196 543 aa15.4■□□□□ 0.06
PLA2G4D-201ENST00000290472 FKBP8Q14318 412 aa15.4■□□□□ 0.06
PLA2G4D-201ENST00000290472 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
PLA2G4D-201ENST00000290472 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
PLA2G4D-201ENST00000290472 CLIP1P30622 1438 aa15.36■□□□□ 0.05
PLA2G4D-201ENST00000290472 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
PLA2G4D-201ENST00000290472 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
PLA2G4D-201ENST00000290472 KIF21BO75037 1637 aa15.34■□□□□ 0.05
PLA2G4D-201ENST00000290472 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
PLA2G4D-201ENST00000290472 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
PLA2G4D-201ENST00000290472 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
PLA2G4D-201ENST00000290472 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
PLA2G4D-201ENST00000290472 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
PLA2G4D-201ENST00000290472 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
PLA2G4D-201ENST00000290472 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
PLA2G4D-201ENST00000290472 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
PLA2G4D-201ENST00000290472 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
PLA2G4D-201ENST00000290472 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
PLA2G4D-201ENST00000290472 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
PLA2G4D-201ENST00000290472 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
PLA2G4D-201ENST00000290472 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
PLA2G4D-201ENST00000290472 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
PLA2G4D-201ENST00000290472 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
PLA2G4D-201ENST00000290472 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
PLA2G4D-201ENST00000290472 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
PLA2G4D-201ENST00000290472 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
PLA2G4D-201ENST00000290472 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
PLA2G4D-201ENST00000290472 HMGXB3Q12766 1538 aa15.08■□□□□ 0
PLA2G4D-201ENST00000290472 KIF27Q86VH2 1401 aa15.08■□□□□ 0
PLA2G4D-201ENST00000290472 SIN3AQ96ST3 1273 aa15.07■□□□□ 0
PLA2G4D-201ENST00000290472 KANK4Q5T7N3 995 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms