Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXR1Q6PIV2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC015819.3-201ENST00000624305 2674 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 PDIA3P1-201ENST00000471856 1510 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 BCRP2-202ENST00000447763 634 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 BCRP6-201ENST00000510112 632 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 BCRP7-201ENST00000511549 544 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AL450472.2-201ENST00000603663 1156 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 AC097359.3-201ENST00000603982 1210 ntBASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXR1Q6PIV2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 AC125807.2-201ENST00000513358 3514 ntBASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 AL162726.2-201ENST00000438986 1017 ntBASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 USP32P1-208ENST00000506594 1164 ntBASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms