Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC006483.2-201ENST00000609813 515 ntBASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.64■□□□□ 0.42
CCDC93Q567U6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 ACTBP7-201ENST00000418351 1124 ntBASIC17.64■□□□□ 0.41
CCDC93Q567U6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AC021016.3-201ENST00000608367 477 ntBASIC17.64■□□□□ 0.41
CCDC93Q567U6 AC007191.1-201ENST00000623179 2995 ntBASIC17.64■□□□□ 0.41
CCDC93Q567U6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 AL591122.2-201ENST00000624125 1853 ntBASIC17.64■□□□□ 0.41
CCDC93Q567U6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC93Q567U6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC93Q567U6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RNVU1-8-201ENST00000364272 125 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 OR51A9P-201ENST00000422578 911 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RN7SL582P-201ENST00000491078 279 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 RN7SL767P-201ENST00000493013 295 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 RN7SL564P-201ENST00000496309 250 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 AL139339.2-201ENST00000608063 657 ntBASIC17.63■□□□□ 0.41
CCDC93Q567U6 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC93Q567U6 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC93Q567U6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms