Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 KLF17P1-201ENST00000547105 1126 ntBASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 NUDT4P2-201ENST00000578341 546 ntBASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 RN7SL470P-201ENST00000583069 259 ntBASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 MIR2392-201ENST00000584881 84 ntBASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 AL132780.4-201ENST00000624870 1135 ntBASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM1Q2M3G4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 DPY19L2P5-201ENST00000456300 331 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 LINC00634-202ENST00000505157 222 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 NDUFB10P1-201ENST00000567319 521 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 MIR5196-201ENST00000578146 115 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 RN7SL665P-201ENST00000578793 300 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC139749.1-202ENST00000617529 3139 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC140479.7-201ENST00000636301 2332 ntBASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHROOM1Q2M3G4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 AL022313.4-201ENST00000562756 2046 ntBASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SHROOM1Q2M3G4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms