Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AL118506.1-201ENST00000601296 3082 ntBASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AGGF1P1-201ENST00000509500 2073 ntBASIC11.23□□□□□ -0.61
HIST1H1AQ02539 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 MIR770-201ENST00000390219 98 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 KLF2P2-201ENST00000416807 1039 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 MYCLP2-201ENST00000449268 967 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC114812.1-204ENST00000449669 728 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 UGT1A2P-201ENST00000454886 866 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AL391825.1-201ENST00000457671 1364 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 KRT18P25-201ENST00000508931 1278 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC124283.3-201ENST00000570869 594 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 PRSS30P-206ENST00000641773 873 ntBASIC11.22□□□□□ -0.61
HIST1H1AQ02539 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H1AQ02539 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H1AQ02539 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms