Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
H3F3AP84243 KRT18P36-201ENST00000411618 1276 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3AP84243 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
H3F3AP84243 SERPINA13P-202ENST00000478994 924 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 SCARNA21-201ENST00000517026 139 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3AP84243 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 SNORD3B-2-202ENST00000571722 791 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3AP84243 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 MIR6869-201ENST00000619434 62 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.98□□□□□ -0.33
H3F3AP84243 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
H3F3AP84243 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3AP84243 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3AP84243 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3AP84243 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 AHCYP4-201ENST00000419201 1315 ntBASIC12.97□□□□□ -0.33
H3F3AP84243 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H3F3AP84243 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H3F3AP84243 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 XBP1P1-201ENST00000436573 652 ntBASIC12.97□□□□□ -0.33
H3F3AP84243 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.97□□□□□ -0.33
H3F3AP84243 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.97□□□□□ -0.33
H3F3AP84243 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 AC090164.2-201ENST00000611487 516 ntBASIC12.97□□□□□ -0.33
H3F3AP84243 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.97□□□□□ -0.33
H3F3AP84243 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3AP84243 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3AP84243 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms