Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PRKDCP78527 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 MIR602-201ENST00000384960 98 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC9.98□□□□□ -0.81
PRKDCP78527 SDCBP2P1-201ENST00000416115 614 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 AC007690.1-201ENST00000451924 468 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 AC034205.3-201ENST00000603595 1376 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 AMT-256ENST00000638063 1783 ntTSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
PRKDCP78527 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
PRKDCP78527 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC9.98□□□□□ -0.81
PRKDCP78527 MIR4326-201ENST00000582203 59 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC9.98□□□□□ -0.81
PRKDCP78527 U62317.4-201ENST00000609758 448 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.98□□□□□ -0.81
PRKDCP78527 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC9.98□□□□□ -0.81
PRKDCP78527 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC9.98□□□□□ -0.81
PRKDCP78527 NOS2P3-201ENST00000411468 867 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.98□□□□□ -0.81
PRKDCP78527 NOS2P2-201ENST00000426269 867 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 APRT-202ENST00000426324 664 ntTSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 RPS15P5-201ENST00000449885 432 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC9.98□□□□□ -0.81
PRKDCP78527 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 AC068134.4-201ENST00000613365 122 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 AL139424.2-202ENST00000641335 1369 ntBASIC9.98□□□□□ -0.81
PRKDCP78527 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC9.98□□□□□ -0.81
PRKDCP78527 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC9.98□□□□□ -0.81
PRKDCP78527 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PRKDCP78527 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 AC074019.1-201ENST00000428788 1096 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 RN7SL789P-201ENST00000478944 293 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 AC105424.1-201ENST00000514583 209 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 ELOBP2-201ENST00000526184 355 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC9.97□□□□□ -0.81
PRKDCP78527 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
PRKDCP78527 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 SNU13-204ENST00000402458 462 ntTSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms