Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AC005034.1-201ENST00000426657 489 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 KLF2P1-201ENST00000447438 1042 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AC119751.2-201ENST00000504529 210 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 EEF1DP1-201ENST00000585891 896 ntBASIC12.69□□□□□ -0.38
HIST1H3AP68431 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H3AP68431 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H3AP68431 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 HLA-V-201ENST00000429037 534 ntBASIC12.68□□□□□ -0.38
HIST1H3AP68431 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AC012441.2-201ENST00000444843 739 ntBASIC12.68□□□□□ -0.38
HIST1H3AP68431 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 RBM8B-201ENST00000555532 525 ntBASIC12.68□□□□□ -0.38
HIST1H3AP68431 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AP005482.1-201ENST00000563722 1273 ntBASIC12.68□□□□□ -0.38
HIST1H3AP68431 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AL035252.4-201ENST00000624174 288 ntBASIC12.68□□□□□ -0.38
HIST1H3AP68431 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H3AP68431 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H3AP68431 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H3AP68431 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
HIST1H3AP68431 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms