Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VBP1P61758 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.04□□□□□ -0.32
VBP1P61758 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.04□□□□□ -0.32
VBP1P61758 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.04□□□□□ -0.32
VBP1P61758 IGHV3-22-201ENST00000520721 359 ntBASIC13.04□□□□□ -0.32
VBP1P61758 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.04□□□□□ -0.32
VBP1P61758 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 AL121912.1-201ENST00000603683 238 ntBASIC13.04□□□□□ -0.32
VBP1P61758 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.04□□□□□ -0.32
VBP1P61758 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VBP1P61758 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 PI4KAP2-201ENST00000360806 2080 ntBASIC13.04□□□□□ -0.32
VBP1P61758 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.03□□□□□ -0.32
VBP1P61758 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.03□□□□□ -0.32
VBP1P61758 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.03□□□□□ -0.32
VBP1P61758 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 KRT8P48-201ENST00000515599 1220 ntBASIC13.03□□□□□ -0.32
VBP1P61758 KRT18P21-201ENST00000515767 1272 ntBASIC13.03□□□□□ -0.32
VBP1P61758 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.03□□□□□ -0.32
VBP1P61758 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
VBP1P61758 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
VBP1P61758 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.03□□□□□ -0.32
VBP1P61758 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 KRT18P8-201ENST00000581937 1246 ntBASIC13.03□□□□□ -0.32
VBP1P61758 MIR6069-201ENST00000620069 79 ntBASIC13.03□□□□□ -0.32
VBP1P61758 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
VBP1P61758 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 MRPL37P1-201ENST00000592451 1337 ntBASIC13.03□□□□□ -0.32
VBP1P61758 AC093525.8-201ENST00000624099 1342 ntBASIC13.03□□□□□ -0.32
VBP1P61758 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VBP1P61758 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.03□□□□□ -0.32
VBP1P61758 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VBP1P61758 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VBP1P61758 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms