Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 U91328.1-201ENST00000437528 223 ntBASIC15.95■□□□□ 0.14
PMS1P54277 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 HOMER2P2-201ENST00000451621 847 ntBASIC15.95■□□□□ 0.14
PMS1P54277 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 CR383656.12-201ENST00000549567 513 ntBASIC15.95■□□□□ 0.14
PMS1P54277 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.95■□□□□ 0.14
PMS1P54277 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.95■□□□□ 0.14
PMS1P54277 MIR6720-201ENST00000611664 98 ntBASIC15.95■□□□□ 0.14
PMS1P54277 BAP1-211ENST00000615113 489 ntBASIC15.95■□□□□ 0.14
PMS1P54277 AC008687.7-202ENST00000637404 953 ntBASIC15.95■□□□□ 0.14
PMS1P54277 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.95■□□□□ 0.14
PMS1P54277 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PMS1P54277 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PMS1P54277 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.94■□□□□ 0.14
PMS1P54277 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.94■□□□□ 0.14
PMS1P54277 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 ST13P19-201ENST00000442505 1124 ntBASIC15.94■□□□□ 0.14
PMS1P54277 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.94■□□□□ 0.14
PMS1P54277 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.94■□□□□ 0.14
PMS1P54277 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 KRT17P8-201ENST00000540749 863 ntBASIC15.94■□□□□ 0.14
PMS1P54277 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.94■□□□□ 0.14
PMS1P54277 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.94■□□□□ 0.14
PMS1P54277 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.94■□□□□ 0.14
PMS1P54277 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.94■□□□□ 0.14
PMS1P54277 Z98259.2-201ENST00000641583 609 ntBASIC15.94■□□□□ 0.14
PMS1P54277 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.94■□□□□ 0.14
PMS1P54277 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.94■□□□□ 0.14
PMS1P54277 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PMS1P54277 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 AC015909.5-201ENST00000624336 2266 ntBASIC15.93■□□□□ 0.14
PMS1P54277 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.93■□□□□ 0.14
PMS1P54277 AC005014.1-201ENST00000432006 2976 ntBASIC15.93■□□□□ 0.14
PMS1P54277 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.93■□□□□ 0.14
PMS1P54277 KLF2P4-201ENST00000451959 1225 ntBASIC15.93■□□□□ 0.14
PMS1P54277 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.93■□□□□ 0.14
PMS1P54277 AC106886.1-201ENST00000568660 600 ntBASIC15.93■□□□□ 0.14
PMS1P54277 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.93■□□□□ 0.14
PMS1P54277 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.93■□□□□ 0.14
PMS1P54277 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PMS1P54277 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms