Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 RPL18AP16-201ENST00000424057 531 ntBASIC21.04■□□□□ 0.96
KDM5CP41229 FDPSP7-201ENST00000429043 1054 ntBASIC21.04■□□□□ 0.96
KDM5CP41229 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC21.04■□□□□ 0.96
KDM5CP41229 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC21.04■□□□□ 0.96
KDM5CP41229 RN7SL602P-201ENST00000578326 324 ntBASIC21.04■□□□□ 0.96
KDM5CP41229 RN7SL718P-201ENST00000581254 303 ntBASIC21.04■□□□□ 0.96
KDM5CP41229 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC21.04■□□□□ 0.96
KDM5CP41229 NEK4P3-201ENST00000604859 544 ntBASIC21.04■□□□□ 0.96
KDM5CP41229 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KDM5CP41229 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KDM5CP41229 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
KDM5CP41229 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.03■□□□□ 0.96
KDM5CP41229 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC21.03■□□□□ 0.96
KDM5CP41229 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.03■□□□□ 0.96
KDM5CP41229 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC21.03■□□□□ 0.96
KDM5CP41229 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21.03■□□□□ 0.96
KDM5CP41229 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.03■□□□□ 0.96
KDM5CP41229 AC245369.7-201ENST00000631386 350 ntBASIC21.03■□□□□ 0.96
KDM5CP41229 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC21.03■□□□□ 0.96
KDM5CP41229 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KDM5CP41229 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
KDM5CP41229 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.03■□□□□ 0.96
KDM5CP41229 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 CICP14-201ENST00000629111 2732 ntBASIC21.03■□□□□ 0.96
KDM5CP41229 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.03■□□□□ 0.96
KDM5CP41229 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.03■□□□□ 0.96
KDM5CP41229 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC21.03■□□□□ 0.96
KDM5CP41229 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
KDM5CP41229 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KDM5CP41229 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.02■□□□□ 0.96
KDM5CP41229 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KDM5CP41229 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KDM5CP41229 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
KDM5CP41229 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC21.02■□□□□ 0.96
KDM5CP41229 RN7SL523P-201ENST00000484401 298 ntBASIC21.02■□□□□ 0.96
KDM5CP41229 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.02■□□□□ 0.96
KDM5CP41229 AC233280.19-201ENST00000633223 136 ntBASIC21.02■□□□□ 0.96
KDM5CP41229 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.02■□□□□ 0.96
KDM5CP41229 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.02■□□□□ 0.96
KDM5CP41229 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.02■□□□□ 0.96
KDM5CP41229 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
KDM5CP41229 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KDM5CP41229 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
KDM5CP41229 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 AC103702.1-201ENST00000548801 2630 ntBASIC21.02■□□□□ 0.95
KDM5CP41229 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
KDM5CP41229 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 KRT18P33-201ENST00000398525 1043 ntBASIC21.02■□□□□ 0.95
KDM5CP41229 DKKL1P1-201ENST00000400550 698 ntBASIC21.02■□□□□ 0.95
KDM5CP41229 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC21.02■□□□□ 0.95
KDM5CP41229 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC21.02■□□□□ 0.95
KDM5CP41229 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC21.02■□□□□ 0.95
KDM5CP41229 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC21.02■□□□□ 0.95
KDM5CP41229 ACY3-202ENST00000529256 933 ntTSL 3 BASIC21.02■□□□□ 0.95
KDM5CP41229 AP003040.1-201ENST00000532044 1024 ntBASIC21.02■□□□□ 0.95
KDM5CP41229 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.02■□□□□ 0.95
KDM5CP41229 AC091304.3-201ENST00000566500 716 ntBASIC21.02■□□□□ 0.95
KDM5CP41229 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KDM5CP41229 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.01■□□□□ 0.95
KDM5CP41229 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 PES1P2-201ENST00000449745 1735 ntBASIC21.01■□□□□ 0.95
KDM5CP41229 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC21.01■□□□□ 0.95
KDM5CP41229 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KDM5CP41229 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 LINC00554-201ENST00000564841 3011 ntBASIC21.01■□□□□ 0.95
KDM5CP41229 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM5CP41229 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM5CP41229 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KDM5CP41229 SNX15-201ENST00000352068 771 ntTSL 5 BASIC21.01■□□□□ 0.95
KDM5CP41229 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC21.01■□□□□ 0.95
KDM5CP41229 MIR611-201ENST00000384869 67 ntBASIC21.01■□□□□ 0.95
KDM5CP41229 PHBP10-201ENST00000416467 784 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms