Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 BAATP1-201ENST00000412284 1225 ntBASIC15.4■□□□□ 0.06
CTNNA1P35221 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.4■□□□□ 0.06
CTNNA1P35221 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.4■□□□□ 0.06
CTNNA1P35221 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
CTNNA1P35221 RPSAP52-203ENST00000622976 1023 ntBASIC15.4■□□□□ 0.06
CTNNA1P35221 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.4■□□□□ 0.06
CTNNA1P35221 AC009093.2-202ENST00000620513 2079 ntBASIC15.4■□□□□ 0.06
CTNNA1P35221 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CTNNA1P35221 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.4■□□□□ 0.06
CTNNA1P35221 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 AC134312.5-201ENST00000568031 1313 ntBASIC15.4■□□□□ 0.06
CTNNA1P35221 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 AL591122.2-201ENST00000624125 1853 ntBASIC15.4■□□□□ 0.06
CTNNA1P35221 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTNNA1P35221 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CTNNA1P35221 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.39■□□□□ 0.05
CTNNA1P35221 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.39■□□□□ 0.05
CTNNA1P35221 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CTNNA1P35221 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.39■□□□□ 0.05
CTNNA1P35221 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 GPALPP1-207ENST00000611650 899 ntBASIC15.39■□□□□ 0.05
CTNNA1P35221 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.39■□□□□ 0.05
CTNNA1P35221 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.39■□□□□ 0.05
CTNNA1P35221 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CTNNA1P35221 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 TUBB8P4-201ENST00000511806 1324 ntBASIC15.39■□□□□ 0.05
CTNNA1P35221 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.39■□□□□ 0.05
CTNNA1P35221 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.39■□□□□ 0.05
CTNNA1P35221 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTNNA1P35221 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CTNNA1P35221 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.38■□□□□ 0.05
CTNNA1P35221 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CTNNA1P35221 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CTNNA1P35221 ACTG1P3-201ENST00000431775 1114 ntBASIC15.38■□□□□ 0.05
CTNNA1P35221 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.38■□□□□ 0.05
CTNNA1P35221 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.38■□□□□ 0.05
CTNNA1P35221 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.38■□□□□ 0.05
CTNNA1P35221 RN7SL204P-201ENST00000582831 262 ntBASIC15.38■□□□□ 0.05
CTNNA1P35221 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.38■□□□□ 0.05
CTNNA1P35221 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.38■□□□□ 0.05
CTNNA1P35221 AC019294.4-201ENST00000561777 2905 ntBASIC15.38■□□□□ 0.05
CTNNA1P35221 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CTNNA1P35221 AC111170.3-201ENST00000624282 2464 ntBASIC15.38■□□□□ 0.05
CTNNA1P35221 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTNNA1P35221 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms