Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
EFNA1P20827 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 FTH1P14-201ENST00000482930 551 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.9□□□□□ -0.18
EFNA1P20827 USP32P1-208ENST00000506594 1164 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.9□□□□□ -0.18
EFNA1P20827 AP005018.1-201ENST00000525475 301 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.9□□□□□ -0.18
EFNA1P20827 AC008735.3-201ENST00000596646 500 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.9□□□□□ -0.18
EFNA1P20827 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
EFNA1P20827 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.9□□□□□ -0.18
EFNA1P20827 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 AL157996.1-201ENST00000624684 2299 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA1P20827 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 AC099521.3-201ENST00000624251 2938 ntBASIC13.9□□□□□ -0.18
EFNA1P20827 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA1P20827 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA1P20827 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
EFNA1P20827 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
EFNA1P20827 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC007389.4-201ENST00000454674 793 ntBASIC13.89□□□□□ -0.19
EFNA1P20827 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA1P20827 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA1P20827 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
EFNA1P20827 AP000593.2-201ENST00000542775 1433 ntBASIC13.89□□□□□ -0.19
EFNA1P20827 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
EFNA1P20827 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA1P20827 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
EFNA1P20827 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA1P20827 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms