Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC3P19447 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.84■□□□□ 0.29
ERCC3P19447 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.84■□□□□ 0.29
ERCC3P19447 MIR3677-201ENST00000578964 60 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 MIR4750-201ENST00000584564 56 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 RN7SL736P-201ENST00000613111 269 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 AC092299.1-201ENST00000632679 757 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ERCC3P19447 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC3P19447 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.29
ERCC3P19447 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ERCC3P19447 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC3P19447 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ERCC3P19447 OR2I1P-210ENST00000642037 4691 ntBASIC16.83■□□□□ 0.29
ERCC3P19447 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ERCC3P19447 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.83■□□□□ 0.28
ERCC3P19447 XBP1P1-201ENST00000436573 652 ntBASIC16.83■□□□□ 0.28
ERCC3P19447 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.83■□□□□ 0.28
ERCC3P19447 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.83■□□□□ 0.28
ERCC3P19447 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.83■□□□□ 0.28
ERCC3P19447 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
ERCC3P19447 LINC01783-202ENST00000614408 828 ntBASIC16.83■□□□□ 0.28
ERCC3P19447 BX284668.2-205ENST00000619677 828 ntBASIC16.83■□□□□ 0.28
ERCC3P19447 AC018629.1-201ENST00000623381 1736 ntBASIC16.83■□□□□ 0.28
ERCC3P19447 AL137784.3-201ENST00000623858 2288 ntBASIC16.83■□□□□ 0.28
ERCC3P19447 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
ERCC3P19447 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
ERCC3P19447 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ERCC3P19447 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERCC3P19447 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC3P19447 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ERCC3P19447 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ERCC3P19447 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC3P19447 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ERCC3P19447 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC3P19447 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC3P19447 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms