Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A2P16615 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
ATP2A2P16615 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A2P16615 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP2A2P16615 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A2P16615 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A2P16615 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A2P16615 AC141586.1-203ENST00000567242 366 ntBASIC16.1■□□□□ 0.17
ATP2A2P16615 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
ATP2A2P16615 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A2P16615 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 AL137784.3-201ENST00000623858 2288 ntBASIC16.1■□□□□ 0.17
ATP2A2P16615 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A2P16615 AL137783.1-201ENST00000623494 1896 ntBASIC16.1■□□□□ 0.17
ATP2A2P16615 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A2P16615 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 AGAP7P-201ENST00000582299 2062 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 AGAP14-201ENST00000624701 2060 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 AC009090.5-201ENST00000624886 2285 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP2A2P16615 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 AC018463.1-201ENST00000456674 917 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.09■□□□□ 0.17
ATP2A2P16615 MEG3_2.1-201ENST00000611456 105 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 AC127024.7-201ENST00000625101 200 ntBASIC16.09■□□□□ 0.17
ATP2A2P16615 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A2P16615 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A2P16615 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A2P16615 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms