Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL6A2P12110 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL6A2P12110 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL6A2P12110 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
COL6A2P12110 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
COL6A2P12110 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
COL6A2P12110 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
COL6A2P12110 AC005229.1-201ENST00000392885 409 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 DGCR5-201ENST00000399539 862 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 CICP12-201ENST00000455801 843 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.37□□□□□ -0.11
COL6A2P12110 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.37□□□□□ -0.11
COL6A2P12110 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.37□□□□□ -0.11
COL6A2P12110 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 AP001889.1-201ENST00000525414 633 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 GNRHR2-203ENST00000581100 1187 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
COL6A2P12110 OR10B1P-201ENST00000601666 907 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 AL096865.1-201ENST00000606796 927 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.37□□□□□ -0.11
COL6A2P12110 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL6A2P12110 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL6A2P12110 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
COL6A2P12110 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
COL6A2P12110 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 AC002472.2-201ENST00000442739 958 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 AC106760.1-201ENST00000508690 800 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 AP003171.2-201ENST00000528208 925 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
COL6A2P12110 AC190387.1-201ENST00000551683 408 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.36□□□□□ -0.11
COL6A2P12110 ECM1P1-201ENST00000604092 1279 ntBASIC14.36□□□□□ -0.11
COL6A2P12110 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COL6A2P12110 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL6A2P12110 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL6A2P12110 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms