Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.02■□□□□ 0.63
CSB-PGBD3P0DP91 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 RN7SL582P-201ENST00000491078 279 ntBASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 RN7SL375P-201ENST00000492442 298 ntBASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 VENTXP3-201ENST00000546480 773 ntBASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 TRMT112P3-201ENST00000580149 358 ntBASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 AL672207.1-201ENST00000328462 1570 ntBASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSB-PGBD3P0DP91 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 AC008026.2-201ENST00000495438 348 ntBASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CSB-PGBD3P0DP91 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 OR51A9P-201ENST00000422578 911 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 KLF17P1-201ENST00000547105 1126 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AP005264.5-201ENST00000590066 467 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AL359091.4-201ENST00000610052 409 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms