Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC068760.1-201ENST00000493579 1953 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 ACTBP14-201ENST00000411655 1089 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC8.91□□□□□ -0.98
PKHD1P08F94 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC8.91□□□□□ -0.98
PKHD1P08F94 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 PRORSD1P-202ENST00000563365 2154 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC215219.1-201ENST00000400706 1817 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 OR52X1P-201ENST00000446117 914 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 DUX4L31-201ENST00000446466 1136 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC010202.1-201ENST00000551181 405 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 FAM223B-202ENST00000598177 713 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 FAM223A-202ENST00000625204 713 ntBASIC8.91□□□□□ -0.98
PKHD1P08F94 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC8.91□□□□□ -0.98
PKHD1P08F94 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC8.91□□□□□ -0.98
PKHD1P08F94 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PKHD1P08F94 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC8.9□□□□□ -0.98
PKHD1P08F94 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC8.9□□□□□ -0.98
PKHD1P08F94 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 SNX20-205ENST00000610485 557 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 HLA-DQB2-231ENST00000435145 2026 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 AP002414.2-201ENST00000591780 3365 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC010086.2-201ENST00000428616 226 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 AC093700.1-201ENST00000503348 717 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AL137028.2-201ENST00000614601 256 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
PKHD1P08F94 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC000078.1-201ENST00000420617 682 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 RBMX2P5-201ENST00000424312 969 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC8.9□□□□□ -0.98
PKHD1P08F94 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 MEP1AP1-201ENST00000636082 1097 ntBASIC8.9□□□□□ -0.98
PKHD1P08F94 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
PKHD1P08F94 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PKHD1P08F94 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
PKHD1P08F94 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC8.9□□□□□ -0.99
PKHD1P08F94 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PKHD1P08F94 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PKHD1P08F94 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PKHD1P08F94 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
PKHD1P08F94 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PKHD1P08F94 AC064850.1-201ENST00000413279 1398 ntBASIC8.9□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms