Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC17.39■□□□□ 0.37
MYCNP04198 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MYCNP04198 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
MYCNP04198 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC17.39■□□□□ 0.37
MYCNP04198 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC17.39■□□□□ 0.37
MYCNP04198 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC17.39■□□□□ 0.37
MYCNP04198 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC17.39■□□□□ 0.37
MYCNP04198 TBCB-207ENST00000586868 466 ntTSL 3 BASIC17.39■□□□□ 0.37
MYCNP04198 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.39■□□□□ 0.37
MYCNP04198 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.39■□□□□ 0.37
MYCNP04198 AL451050.2-201ENST00000606967 682 ntBASIC17.39■□□□□ 0.37
MYCNP04198 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.39■□□□□ 0.37
MYCNP04198 AL121594.5-201ENST00000631724 573 ntBASIC17.39■□□□□ 0.37
MYCNP04198 AC006453.4-201ENST00000636949 1252 ntBASIC17.39■□□□□ 0.37
MYCNP04198 AC116631.1-202ENST00000640984 683 ntBASIC17.39■□□□□ 0.37
MYCNP04198 LINC02211-204ENST00000642024 1070 ntBASIC17.39■□□□□ 0.37
MYCNP04198 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MYCNP04198 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 PSMC1P1-201ENST00000478110 1320 ntBASIC17.39■□□□□ 0.37
MYCNP04198 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
MYCNP04198 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.39■□□□□ 0.37
MYCNP04198 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MYCNP04198 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MYCNP04198 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 AL137784.3-201ENST00000623858 2288 ntBASIC17.38■□□□□ 0.37
MYCNP04198 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.38■□□□□ 0.37
MYCNP04198 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 AC245060.4-201ENST00000413293 1121 ntBASIC17.38■□□□□ 0.37
MYCNP04198 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC17.38■□□□□ 0.37
MYCNP04198 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 RPS3AP44-201ENST00000425466 790 ntBASIC17.38■□□□□ 0.37
MYCNP04198 Z84478.1-201ENST00000438230 1219 ntBASIC17.38■□□□□ 0.37
MYCNP04198 BMI1P1-201ENST00000445879 941 ntBASIC17.38■□□□□ 0.37
MYCNP04198 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 AC020898.1-201ENST00000474167 787 ntBASIC17.38■□□□□ 0.37
MYCNP04198 Y_RNA.688-201ENST00000516565 95 ntBASIC17.38■□□□□ 0.37
MYCNP04198 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MYCNP04198 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC17.38■□□□□ 0.37
MYCNP04198 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.38■□□□□ 0.37
MYCNP04198 AL356608.1-201ENST00000610034 820 ntBASIC17.38■□□□□ 0.37
MYCNP04198 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.38■□□□□ 0.37
MYCNP04198 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MYCNP04198 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MYCNP04198 AL356488.3-201ENST00000608574 2888 ntBASIC17.38■□□□□ 0.37
MYCNP04198 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MYCNP04198 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 CA6-205ENST00000480186 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.37■□□□□ 0.37
MYCNP04198 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MYCNP04198 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.37■□□□□ 0.37
MYCNP04198 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MYCNP04198 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MYCNP04198 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
MYCNP04198 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms