RNA–Protein interactions for RNA: ENST00000425466.1

RPS3AP44-201, Transcript of ribosomal protein S3a pseudogene 44, humanhuman

BASIC

Gene RPS3AP44, Length 790 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP44-201ENST00000425466 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
RPS3AP44-201ENST00000425466 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
RPS3AP44-201ENST00000425466 SENP3Q9H4L4 574 aaPredicted RBP25.39■■□□□ 1.66
RPS3AP44-201ENST00000425466 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
RPS3AP44-201ENST00000425466 FOXD1Q16676 465 aa23.76■■□□□ 1.39
RPS3AP44-201ENST00000425466 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
RPS3AP44-201ENST00000425466 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
RPS3AP44-201ENST00000425466 ADRA2BP18089 450 aa22.19■■□□□ 1.14
RPS3AP44-201ENST00000425466 PIAS4Q8N2W9 510 aaPredicted RBP22.14■■□□□ 1.13
RPS3AP44-201ENST00000425466 MSH5O43196 834 aa22.11■■□□□ 1.13
RPS3AP44-201ENST00000425466 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
RPS3AP44-201ENST00000425466 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
RPS3AP44-201ENST00000425466 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
RPS3AP44-201ENST00000425466 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
RPS3AP44-201ENST00000425466 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
RPS3AP44-201ENST00000425466 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
RPS3AP44-201ENST00000425466 HOXD11P31277 338 aaPredicted RBP19.46■□□□□ 0.71
RPS3AP44-201ENST00000425466 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
RPS3AP44-201ENST00000425466 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
RPS3AP44-201ENST00000425466 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
RPS3AP44-201ENST00000425466 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
RPS3AP44-201ENST00000425466 RNF39Q9H2S5 420 aa18.93■□□□□ 0.62
RPS3AP44-201ENST00000425466 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
RPS3AP44-201ENST00000425466 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
RPS3AP44-201ENST00000425466 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
RPS3AP44-201ENST00000425466 KCNA4P22459 653 aa18.56■□□□□ 0.56
RPS3AP44-201ENST00000425466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
RPS3AP44-201ENST00000425466 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
RPS3AP44-201ENST00000425466 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
RPS3AP44-201ENST00000425466 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
RPS3AP44-201ENST00000425466 CAPN15O75808 1086 aa17.82■□□□□ 0.44
RPS3AP44-201ENST00000425466 DSG3P32926 999 aa17.76■□□□□ 0.43
RPS3AP44-201ENST00000425466 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
RPS3AP44-201ENST00000425466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
RPS3AP44-201ENST00000425466 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
RPS3AP44-201ENST00000425466 APLP2Q06481 763 aa17.5■□□□□ 0.39
RPS3AP44-201ENST00000425466 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
RPS3AP44-201ENST00000425466 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
RPS3AP44-201ENST00000425466 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
RPS3AP44-201ENST00000425466 ABCB7O75027 752 aa17.45■□□□□ 0.38
RPS3AP44-201ENST00000425466 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
RPS3AP44-201ENST00000425466 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
RPS3AP44-201ENST00000425466 POLA2Q14181 598 aa17.12■□□□□ 0.33
RPS3AP44-201ENST00000425466 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
RPS3AP44-201ENST00000425466 ZBTB22O15209 634 aa17.1■□□□□ 0.33
RPS3AP44-201ENST00000425466 POTEHQ6S545 545 aa16.92■□□□□ 0.3
RPS3AP44-201ENST00000425466 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
RPS3AP44-201ENST00000425466 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
RPS3AP44-201ENST00000425466 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
RPS3AP44-201ENST00000425466 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
RPS3AP44-201ENST00000425466 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
RPS3AP44-201ENST00000425466 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
RPS3AP44-201ENST00000425466 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
RPS3AP44-201ENST00000425466 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
RPS3AP44-201ENST00000425466 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
RPS3AP44-201ENST00000425466 FBLN2P98095 1184 aa16.29■□□□□ 0.2
RPS3AP44-201ENST00000425466 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
RPS3AP44-201ENST00000425466 SPDYE2BA6NHP3 402 aa16.2■□□□□ 0.18
RPS3AP44-201ENST00000425466 SPDYE6P0CI01 402 aa16.2■□□□□ 0.18
RPS3AP44-201ENST00000425466 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
RPS3AP44-201ENST00000425466 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
RPS3AP44-201ENST00000425466 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPS3AP44-201ENST00000425466 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
RPS3AP44-201ENST00000425466 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
RPS3AP44-201ENST00000425466 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
RPS3AP44-201ENST00000425466 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
RPS3AP44-201ENST00000425466 SPDYE1Q8NFV5 336 aaPredicted RBP15.9■□□□□ 0.14
RPS3AP44-201ENST00000425466 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
RPS3AP44-201ENST00000425466 HAX1O00165 279 aa15.84■□□□□ 0.13
RPS3AP44-201ENST00000425466 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
RPS3AP44-201ENST00000425466 PRKAR2AP13861 404 aaKnown RBP15.79■□□□□ 0.12
RPS3AP44-201ENST00000425466 EVX2Q03828 476 aa15.76■□□□□ 0.11
RPS3AP44-201ENST00000425466 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
RPS3AP44-201ENST00000425466 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
RPS3AP44-201ENST00000425466 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
RPS3AP44-201ENST00000425466 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
RPS3AP44-201ENST00000425466 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
RPS3AP44-201ENST00000425466 GABBR2O75899 941 aa15.33■□□□□ 0.04
RPS3AP44-201ENST00000425466 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
RPS3AP44-201ENST00000425466 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
RPS3AP44-201ENST00000425466 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.04
RPS3AP44-201ENST00000425466 PROM2Q8N271 834 aa15.13■□□□□ 0.01
RPS3AP44-201ENST00000425466 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
RPS3AP44-201ENST00000425466 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
RPS3AP44-201ENST00000425466 POTEIP0CG38 1075 aa15.06■□□□□ 0
RPS3AP44-201ENST00000425466 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
RPS3AP44-201ENST00000425466 CLCN6P51797 869 aa14.98□□□□□ -0.01
RPS3AP44-201ENST00000425466 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
RPS3AP44-201ENST00000425466 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
RPS3AP44-201ENST00000425466 LHX8Q68G74 356 aa14.9□□□□□ -0.02
RPS3AP44-201ENST00000425466 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
RPS3AP44-201ENST00000425466 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
RPS3AP44-201ENST00000425466 DCBLD2Q96PD2 775 aa14.86□□□□□ -0.03
RPS3AP44-201ENST00000425466 MIER1Q8N108 512 aa14.77□□□□□ -0.05
RPS3AP44-201ENST00000425466 FKBP8Q14318 412 aa14.75□□□□□ -0.05
RPS3AP44-201ENST00000425466 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
RPS3AP44-201ENST00000425466 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
RPS3AP44-201ENST00000425466 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
RPS3AP44-201ENST00000425466 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
RPS3AP44-201ENST00000425466 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms