RNA–Protein interactions for RNA: ENST00000416002.1

AF240627.1-201, humanhuman

TSL 3 BASIC

Gene AF240627.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF240627.1-201ENST00000416002 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
AF240627.1-201ENST00000416002 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
AF240627.1-201ENST00000416002 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
AF240627.1-201ENST00000416002 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
AF240627.1-201ENST00000416002 FOXD1Q16676 465 aa23.45■■□□□ 1.34
AF240627.1-201ENST00000416002 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
AF240627.1-201ENST00000416002 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
AF240627.1-201ENST00000416002 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
AF240627.1-201ENST00000416002 MSH5O43196 834 aa21.95■■□□□ 1.1
AF240627.1-201ENST00000416002 ADRA2BP18089 450 aa21.95■■□□□ 1.1
AF240627.1-201ENST00000416002 POTEDQ86YR6 584 aa21.21■□□□□ 0.99
AF240627.1-201ENST00000416002 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
AF240627.1-201ENST00000416002 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
AF240627.1-201ENST00000416002 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
AF240627.1-201ENST00000416002 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
AF240627.1-201ENST00000416002 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
AF240627.1-201ENST00000416002 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
AF240627.1-201ENST00000416002 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
AF240627.1-201ENST00000416002 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
AF240627.1-201ENST00000416002 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
AF240627.1-201ENST00000416002 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
AF240627.1-201ENST00000416002 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
AF240627.1-201ENST00000416002 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
AF240627.1-201ENST00000416002 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
AF240627.1-201ENST00000416002 KCNA4P22459 653 aa18.49■□□□□ 0.55
AF240627.1-201ENST00000416002 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
AF240627.1-201ENST00000416002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
AF240627.1-201ENST00000416002 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
AF240627.1-201ENST00000416002 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
AF240627.1-201ENST00000416002 CAPN15O75808 1086 aa17.72■□□□□ 0.43
AF240627.1-201ENST00000416002 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
AF240627.1-201ENST00000416002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
AF240627.1-201ENST00000416002 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
AF240627.1-201ENST00000416002 APLP2Q06481 763 aa17.59■□□□□ 0.41
AF240627.1-201ENST00000416002 DSG3P32926 999 aa17.56■□□□□ 0.4
AF240627.1-201ENST00000416002 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
AF240627.1-201ENST00000416002 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
AF240627.1-201ENST00000416002 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
AF240627.1-201ENST00000416002 ZNF219Q9P2Y4 722 aaPredicted RBP17.43■□□□□ 0.38
AF240627.1-201ENST00000416002 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
AF240627.1-201ENST00000416002 ABCB7O75027 752 aa17.29■□□□□ 0.36
AF240627.1-201ENST00000416002 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
AF240627.1-201ENST00000416002 POLA2Q14181 598 aa17.01■□□□□ 0.31
AF240627.1-201ENST00000416002 ZBTB22O15209 634 aa16.96■□□□□ 0.31
AF240627.1-201ENST00000416002 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
AF240627.1-201ENST00000416002 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
AF240627.1-201ENST00000416002 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
AF240627.1-201ENST00000416002 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
AF240627.1-201ENST00000416002 POTEHQ6S545 545 aa16.66■□□□□ 0.26
AF240627.1-201ENST00000416002 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
AF240627.1-201ENST00000416002 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
AF240627.1-201ENST00000416002 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
AF240627.1-201ENST00000416002 FBLN2P98095 1184 aa16.33■□□□□ 0.2
AF240627.1-201ENST00000416002 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
AF240627.1-201ENST00000416002 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
AF240627.1-201ENST00000416002 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
AF240627.1-201ENST00000416002 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
AF240627.1-201ENST00000416002 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
AF240627.1-201ENST00000416002 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
AF240627.1-201ENST00000416002 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
AF240627.1-201ENST00000416002 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
AF240627.1-201ENST00000416002 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
AF240627.1-201ENST00000416002 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
AF240627.1-201ENST00000416002 SSUH2Q9Y2M2 353 aa15.93■□□□□ 0.14
AF240627.1-201ENST00000416002 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
AF240627.1-201ENST00000416002 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
AF240627.1-201ENST00000416002 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
AF240627.1-201ENST00000416002 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
AF240627.1-201ENST00000416002 HAX1O00165 279 aa15.71■□□□□ 0.11
AF240627.1-201ENST00000416002 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
AF240627.1-201ENST00000416002 SP7Q8TDD2 431 aaPredicted RBP15.67■□□□□ 0.1
AF240627.1-201ENST00000416002 PRR29P0C7W0 189 aa15.61■□□□□ 0.09
AF240627.1-201ENST00000416002 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
AF240627.1-201ENST00000416002 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
AF240627.1-201ENST00000416002 EVX2Q03828 476 aa15.45■□□□□ 0.06
AF240627.1-201ENST00000416002 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
AF240627.1-201ENST00000416002 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
AF240627.1-201ENST00000416002 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
AF240627.1-201ENST00000416002 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
AF240627.1-201ENST00000416002 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
AF240627.1-201ENST00000416002 GABBR2O75899 941 aa15.15■□□□□ 0.02
AF240627.1-201ENST00000416002 PROM2Q8N271 834 aa15.08■□□□□ 0
AF240627.1-201ENST00000416002 CLCN6P51797 869 aa15.01□□□□□ -0.01
AF240627.1-201ENST00000416002 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
AF240627.1-201ENST00000416002 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
AF240627.1-201ENST00000416002 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
AF240627.1-201ENST00000416002 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
AF240627.1-201ENST00000416002 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
AF240627.1-201ENST00000416002 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
AF240627.1-201ENST00000416002 FKBP8Q14318 412 aa14.81□□□□□ -0.04
AF240627.1-201ENST00000416002 MIER1Q8N108 512 aa14.8□□□□□ -0.04
AF240627.1-201ENST00000416002 DCBLD2Q96PD2 775 aa14.8□□□□□ -0.04
AF240627.1-201ENST00000416002 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
AF240627.1-201ENST00000416002 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
AF240627.1-201ENST00000416002 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
AF240627.1-201ENST00000416002 LHX8Q68G74 356 aa14.72□□□□□ -0.05
AF240627.1-201ENST00000416002 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
AF240627.1-201ENST00000416002 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
AF240627.1-201ENST00000416002 ZBTB47Q9UFB7 747 aaPredicted RBP14.59□□□□□ -0.07
AF240627.1-201ENST00000416002 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms