RNA–Protein interactions for RNA: ENST00000566439.2

LINC02180-201, Transcript of long intergenic non-protein coding RNA 2180, humanhuman

TSL 3 BASIC

Gene LINC02180, Length 1,010 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02180-201ENST00000566439 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
LINC02180-201ENST00000566439 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
LINC02180-201ENST00000566439 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
LINC02180-201ENST00000566439 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
LINC02180-201ENST00000566439 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
LINC02180-201ENST00000566439 FOXD1Q16676 465 aa21.45■■□□□ 1.02
LINC02180-201ENST00000566439 ADRA2BP18089 450 aa20.84■□□□□ 0.93
LINC02180-201ENST00000566439 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
LINC02180-201ENST00000566439 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
LINC02180-201ENST00000566439 MSH5O43196 834 aa19.78■□□□□ 0.76
LINC02180-201ENST00000566439 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
LINC02180-201ENST00000566439 KCNA4P22459 653 aa19.31■□□□□ 0.68
LINC02180-201ENST00000566439 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
LINC02180-201ENST00000566439 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
LINC02180-201ENST00000566439 CNKSR2Q8WXI2 1034 aa18.88■□□□□ 0.61
LINC02180-201ENST00000566439 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
LINC02180-201ENST00000566439 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
LINC02180-201ENST00000566439 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
LINC02180-201ENST00000566439 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
LINC02180-201ENST00000566439 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
LINC02180-201ENST00000566439 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
LINC02180-201ENST00000566439 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
LINC02180-201ENST00000566439 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
LINC02180-201ENST00000566439 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
LINC02180-201ENST00000566439 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
LINC02180-201ENST00000566439 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
LINC02180-201ENST00000566439 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
LINC02180-201ENST00000566439 ZBTB22O15209 634 aa17.73■□□□□ 0.43
LINC02180-201ENST00000566439 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
LINC02180-201ENST00000566439 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
LINC02180-201ENST00000566439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC02180-201ENST00000566439 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
LINC02180-201ENST00000566439 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
LINC02180-201ENST00000566439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
LINC02180-201ENST00000566439 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
LINC02180-201ENST00000566439 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
LINC02180-201ENST00000566439 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
LINC02180-201ENST00000566439 APLP2Q06481 763 aa16.94■□□□□ 0.3
LINC02180-201ENST00000566439 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
LINC02180-201ENST00000566439 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
LINC02180-201ENST00000566439 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
LINC02180-201ENST00000566439 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
LINC02180-201ENST00000566439 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
LINC02180-201ENST00000566439 CAPN15O75808 1086 aa16.58■□□□□ 0.24
LINC02180-201ENST00000566439 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
LINC02180-201ENST00000566439 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
LINC02180-201ENST00000566439 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
LINC02180-201ENST00000566439 POLA2Q14181 598 aa16.3■□□□□ 0.2
LINC02180-201ENST00000566439 ABCB7O75027 752 aa16.27■□□□□ 0.2
LINC02180-201ENST00000566439 FKBP8Q14318 412 aa16.21■□□□□ 0.19
LINC02180-201ENST00000566439 FBLN2P98095 1184 aa16.2■□□□□ 0.18
LINC02180-201ENST00000566439 DSG3P32926 999 aa16.18■□□□□ 0.18
LINC02180-201ENST00000566439 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
LINC02180-201ENST00000566439 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
LINC02180-201ENST00000566439 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
LINC02180-201ENST00000566439 ABCC9O60706 1549 aa15.89■□□□□ 0.13
LINC02180-201ENST00000566439 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
LINC02180-201ENST00000566439 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
LINC02180-201ENST00000566439 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
LINC02180-201ENST00000566439 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
LINC02180-201ENST00000566439 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
LINC02180-201ENST00000566439 PROM2Q8N271 834 aa15.65■□□□□ 0.1
LINC02180-201ENST00000566439 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
LINC02180-201ENST00000566439 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
LINC02180-201ENST00000566439 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
LINC02180-201ENST00000566439 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC02180-201ENST00000566439 VASPP50552 380 aaPredicted RBP15.35■□□□□ 0.05
LINC02180-201ENST00000566439 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.05
LINC02180-201ENST00000566439 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
LINC02180-201ENST00000566439 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
LINC02180-201ENST00000566439 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
LINC02180-201ENST00000566439 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
LINC02180-201ENST00000566439 NACADO15069 1562 aa15.28■□□□□ 0.04
LINC02180-201ENST00000566439 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
LINC02180-201ENST00000566439 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
LINC02180-201ENST00000566439 RTN4Q9NQC3 1192 aaKnown RBP15.17■□□□□ 0.02
LINC02180-201ENST00000566439 DCAF1Q9Y4B6 1507 aa15.16■□□□□ 0.02
LINC02180-201ENST00000566439 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
LINC02180-201ENST00000566439 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
LINC02180-201ENST00000566439 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
LINC02180-201ENST00000566439 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
LINC02180-201ENST00000566439 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
LINC02180-201ENST00000566439 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
LINC02180-201ENST00000566439 IFNLR1Q8IU57 520 aaPredicted RBP15.09■□□□□ 0.01
LINC02180-201ENST00000566439 MIER1Q8N108 512 aa15.06■□□□□ 0
LINC02180-201ENST00000566439 KLHL34Q8N239 644 aa15.04■□□□□ -0
LINC02180-201ENST00000566439 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
LINC02180-201ENST00000566439 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
LINC02180-201ENST00000566439 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
LINC02180-201ENST00000566439 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
LINC02180-201ENST00000566439 SPOCK2Q92563 424 aa14.94□□□□□ -0.02
LINC02180-201ENST00000566439 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
LINC02180-201ENST00000566439 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
LINC02180-201ENST00000566439 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
LINC02180-201ENST00000566439 PKD2Q13563 968 aa14.69□□□□□ -0.06
LINC02180-201ENST00000566439 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
LINC02180-201ENST00000566439 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
LINC02180-201ENST00000566439 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC02180-201ENST00000566439 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
LINC02180-201ENST00000566439 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms