Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 E2F3P2-201ENST00000447755 1422 ntBASIC14.51□□□□□ -0.09
NDUFS3O75489 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 AC064801.2-201ENST00000625052 1303 ntBASIC14.51□□□□□ -0.09
NDUFS3O75489 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NDUFS3O75489 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.51□□□□□ -0.09
NDUFS3O75489 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.51□□□□□ -0.09
NDUFS3O75489 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.51□□□□□ -0.09
NDUFS3O75489 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 ACA64.2-201ENST00000459014 129 ntBASIC14.51□□□□□ -0.09
NDUFS3O75489 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 DUX4L46-201ENST00000566845 751 ntBASIC14.51□□□□□ -0.09
NDUFS3O75489 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NDUFS3O75489 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 AL023775.1-201ENST00000454907 1746 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 ANKRD19P-201ENST00000338192 862 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.5□□□□□ -0.09
NDUFS3O75489 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.5□□□□□ -0.09
NDUFS3O75489 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 AL161932.2-201ENST00000435436 679 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 AC100850.1-201ENST00000506768 649 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.5□□□□□ -0.09
NDUFS3O75489 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.5□□□□□ -0.09
NDUFS3O75489 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NDUFS3O75489 SNX29P1-201ENST00000548357 1007 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.5□□□□□ -0.09
NDUFS3O75489 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NDUFS3O75489 MIR6775-201ENST00000617557 69 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.5□□□□□ -0.09
NDUFS3O75489 CICP16-201ENST00000502609 2813 ntBASIC14.5□□□□□ -0.09
NDUFS3O75489 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NDUFS3O75489 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NDUFS3O75489 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms