Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AL050341.2-201ENST00000567508 1541 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 BRD7P5-201ENST00000299197 1822 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 KRT18P44-201ENST00000416086 1285 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL69P-201ENST00000468423 272 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC025594.1-201ENST00000469533 543 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC079414.2-201ENST00000567157 1104 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL275P-201ENST00000582762 335 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 AC005274.1-201ENST00000623460 802 ntBASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C1QTNF9BB2RNN3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 CFL1P6-201ENST00000400899 494 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 PSAT1P2-201ENST00000426107 972 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 HMGA1P2-201ENST00000430198 324 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL128P-201ENST00000467883 305 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL672P-201ENST00000474091 317 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL578P-201ENST00000477781 283 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 DPY19L2P4-201ENST00000479881 442 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 AC092910.2-201ENST00000491262 348 ntBASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.48□□□□□ -0.25
C1QTNF9BB2RNN3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms