Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC074138.1-201ENST00000611182 1303 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC008267.1-201ENST00000474858 1069 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC140658.4-201ENST00000561990 352 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC005586.2-201ENST00000563946 837 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 SIGLEC18P-201ENST00000602271 909 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC073352.2-201ENST00000609385 439 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 AP002353.1-201ENST00000528257 1599 ntBASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TBC1D3FA6NER0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 AC098935.1-201ENST00000446057 611 ntBASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 AC114947.1-202ENST00000514136 344 ntBASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 IQSEC3P1-201ENST00000538799 536 ntBASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms