Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA2Q9Y5H9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA2Q9Y5H9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHA2Q9Y5H9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 SRD5A1P1-201ENST00000442297 786 ntBASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA2Q9Y5H9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHA2Q9Y5H9 AL022069.1-201ENST00000568025 1636 ntBASIC25.45■■□□□ 1.67
PCDHA2Q9Y5H9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 AL161729.1-201ENST00000604104 1402 ntBASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA2Q9Y5H9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 AC106739.1-201ENST00000617035 715 ntBASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA2Q9Y5H9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 UNC93B3-201ENST00000308076 687 ntBASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA2Q9Y5H9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 MIR935-201ENST00000401179 91 ntBASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 PBX2P1-201ENST00000493219 1291 ntBASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA2Q9Y5H9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHA2Q9Y5H9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA2Q9Y5H9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA2Q9Y5H9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA2Q9Y5H9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA2Q9Y5H9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA2Q9Y5H9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHA2Q9Y5H9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.39■■□□□ 1.65
PCDHA2Q9Y5H9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 AL136162.1-201ENST00000607711 1078 ntBASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHA2Q9Y5H9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms