Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 AC004448.1-201ENST00000458332 883 ntBASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 AC068473.5-201ENST00000616428 2072 ntBASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 LINC00543-201ENST00000567234 1845 ntBASIC21.78■■□□□ 1.08
PCDHGA6Q9Y5G7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA6Q9Y5G7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA6Q9Y5G7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA6Q9Y5G7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHGA6Q9Y5G7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA6Q9Y5G7 SLC6A10P-202ENST00000431994 2058 ntBASIC21.76■■□□□ 1.07
PCDHGA6Q9Y5G7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA6Q9Y5G7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA6Q9Y5G7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 PBX2P1-201ENST00000493219 1291 ntBASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA6Q9Y5G7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGA6Q9Y5G7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 UNC93B3-201ENST00000308076 687 ntBASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA6Q9Y5G7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA6Q9Y5G7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA6Q9Y5G7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 AL136162.1-201ENST00000607711 1078 ntBASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 AC005703.6-201ENST00000623265 1329 ntBASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms