Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.68■■□□□ 1.22
CPSF2Q9P2I0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 SLC25A24-204ENST00000569674 2357 ntBASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 AC129492.7-201ENST00000622992 756 ntBASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPSF2Q9P2I0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CPSF2Q9P2I0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 KRT18P60-201ENST00000312876 1297 ntBASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPSF2Q9P2I0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.64■■□□□ 1.22
CPSF2Q9P2I0 AL121603.2-201ENST00000557373 2117 ntBASIC22.64■■□□□ 1.22
CPSF2Q9P2I0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPSF2Q9P2I0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CPSF2Q9P2I0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPSF2Q9P2I0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPSF2Q9P2I0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 LONRF2P2-201ENST00000439212 571 ntBASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CPSF2Q9P2I0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 RNF165-205ENST00000588679 2904 ntBASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 ANOS2P-203ENST00000472227 1816 ntBASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CPSF2Q9P2I0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms