Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.19■□□□□ 0.98
KLHL1Q9NR64 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 AL139246.5-201ENST00000606645 996 ntBASIC21.18■□□□□ 0.98
KLHL1Q9NR64 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KLHL1Q9NR64 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
KLHL1Q9NR64 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.17■□□□□ 0.98
KLHL1Q9NR64 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
KLHL1Q9NR64 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KLHL1Q9NR64 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 MIR638-201ENST00000385237 100 ntBASIC21.15■□□□□ 0.98
KLHL1Q9NR64 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 AC096631.2-201ENST00000436136 790 ntBASIC21.15■□□□□ 0.98
KLHL1Q9NR64 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KLHL1Q9NR64 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KLHL1Q9NR64 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KLHL1Q9NR64 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KLHL1Q9NR64 AC004448.1-201ENST00000458332 883 ntBASIC21.14■□□□□ 0.97
KLHL1Q9NR64 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KLHL1Q9NR64 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.14■□□□□ 0.97
KLHL1Q9NR64 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.14■□□□□ 0.97
KLHL1Q9NR64 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KLHL1Q9NR64 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KLHL1Q9NR64 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 AC110285.6-201ENST00000617652 491 ntBASIC21.12■□□□□ 0.97
KLHL1Q9NR64 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms