Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C12orf4Q9NQ89 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf4Q9NQ89 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
C12orf4Q9NQ89 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf4Q9NQ89 AL391422.3-201ENST00000603791 2761 ntBASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 GPX1-201ENST00000419349 1106 ntBASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf4Q9NQ89 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf4Q9NQ89 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 AL117328.2-201ENST00000624617 1940 ntBASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf4Q9NQ89 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 AC092667.1-201ENST00000434301 2586 ntBASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 MIR4449-201ENST00000578365 66 ntBASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf4Q9NQ89 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C12orf4Q9NQ89 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms