Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 AL136116.3-201ENST00000402907 1138 ntBASIC27.37■■□□□ 1.97
CWC22Q9HCG8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CWC22Q9HCG8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.37■■□□□ 1.97
CWC22Q9HCG8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.37■■□□□ 1.97
CWC22Q9HCG8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.37■■□□□ 1.97
CWC22Q9HCG8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.37■■□□□ 1.97
CWC22Q9HCG8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 MIR638-201ENST00000385237 100 ntBASIC27.36■■□□□ 1.97
CWC22Q9HCG8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 AC131281.2-201ENST00000520478 145 ntBASIC27.36■■□□□ 1.97
CWC22Q9HCG8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 AL139246.5-201ENST00000606645 996 ntBASIC27.36■■□□□ 1.97
CWC22Q9HCG8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CWC22Q9HCG8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CWC22Q9HCG8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CWC22Q9HCG8 FOXO3B-201ENST00000395675 1928 ntBASIC27.33■■□□□ 1.97
CWC22Q9HCG8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CWC22Q9HCG8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CWC22Q9HCG8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.32■■□□□ 1.96
CWC22Q9HCG8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 MIR6724-1-201ENST00000616420 92 ntBASIC27.31■■□□□ 1.96
CWC22Q9HCG8 MIR6724-2-201ENST00000616483 92 ntBASIC27.31■■□□□ 1.96
CWC22Q9HCG8 MIR6724-4-201ENST00000617390 92 ntBASIC27.31■■□□□ 1.96
CWC22Q9HCG8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 MIR6724-3-201ENST00000622482 92 ntBASIC27.31■■□□□ 1.96
CWC22Q9HCG8 AL117332.1-201ENST00000622628 974 ntBASIC27.31■■□□□ 1.96
CWC22Q9HCG8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CWC22Q9HCG8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 AL356740.2-201ENST00000601559 647 ntBASIC27.3■■□□□ 1.96
CWC22Q9HCG8 AC011551.1-201ENST00000614101 683 ntBASIC27.3■■□□□ 1.96
CWC22Q9HCG8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CWC22Q9HCG8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.29■■□□□ 1.96
CWC22Q9HCG8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CWC22Q9HCG8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CWC22Q9HCG8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CWC22Q9HCG8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CWC22Q9HCG8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CWC22Q9HCG8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CWC22Q9HCG8 C9orf163-202ENST00000624034 2573 ntBASIC27.27■■□□□ 1.96
CWC22Q9HCG8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms