Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCNX3Q9H6A9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 AL117332.1-201ENST00000622628 974 ntBASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCNX3Q9H6A9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCNX3Q9H6A9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCNX3Q9H6A9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCNX3Q9H6A9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
PCNX3Q9H6A9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCNX3Q9H6A9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCNX3Q9H6A9 AC079630.1-202ENST00000618127 1840 ntBASIC20.64■□□□□ 0.9
PCNX3Q9H6A9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCNX3Q9H6A9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCNX3Q9H6A9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 AL161729.1-201ENST00000604104 1402 ntBASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.63■□□□□ 0.89
PCNX3Q9H6A9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCNX3Q9H6A9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCNX3Q9H6A9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 AL356740.2-201ENST00000601559 647 ntBASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCNX3Q9H6A9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PCNX3Q9H6A9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCNX3Q9H6A9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms