Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.88■□□□□ 0.93
TM9SF2Q99805 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF2Q99805 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF2Q99805 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF2Q99805 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TM9SF2Q99805 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM9SF2Q99805 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.87■□□□□ 0.93
TM9SF2Q99805 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM9SF2Q99805 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TM9SF2Q99805 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.86■□□□□ 0.93
TM9SF2Q99805 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.86■□□□□ 0.93
TM9SF2Q99805 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TM9SF2Q99805 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TM9SF2Q99805 CLDN5-201ENST00000403084 2357 ntBASIC20.86■□□□□ 0.93
TM9SF2Q99805 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TM9SF2Q99805 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF2Q99805 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF2Q99805 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.85■□□□□ 0.93
TM9SF2Q99805 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TM9SF2Q99805 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF2Q99805 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TM9SF2Q99805 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TM9SF2Q99805 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF2Q99805 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TM9SF2Q99805 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF2Q99805 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM9SF2Q99805 MTDHP2-201ENST00000601468 714 ntBASIC20.83■□□□□ 0.93
TM9SF2Q99805 AC010997.5-201ENST00000609182 354 ntBASIC20.83■□□□□ 0.93
TM9SF2Q99805 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM9SF2Q99805 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM9SF2Q99805 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.82■□□□□ 0.92
TM9SF2Q99805 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM9SF2Q99805 AF131216.4-201ENST00000638924 1588 ntBASIC20.81■□□□□ 0.92
TM9SF2Q99805 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF2Q99805 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.81■□□□□ 0.92
TM9SF2Q99805 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TM9SF2Q99805 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.81■□□□□ 0.92
TM9SF2Q99805 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
TM9SF2Q99805 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF2Q99805 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM9SF2Q99805 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF2Q99805 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF2Q99805 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
TM9SF2Q99805 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF2Q99805 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.8■□□□□ 0.92
TM9SF2Q99805 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF2Q99805 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.8■□□□□ 0.92
TM9SF2Q99805 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM9SF2Q99805 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.79■□□□□ 0.92
TM9SF2Q99805 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF2Q99805 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
TM9SF2Q99805 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TM9SF2Q99805 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF2Q99805 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM9SF2Q99805 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF2Q99805 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 1243.1 ms