Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 CLDN5-201ENST00000403084 2357 ntBASIC19.32■□□□□ 0.68
RAB39BQ96DA2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB39BQ96DA2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB39BQ96DA2 AC131281.2-201ENST00000520478 145 ntBASIC19.31■□□□□ 0.68
RAB39BQ96DA2 MIR6089-201ENST00000616698 64 ntBASIC19.31■□□□□ 0.68
RAB39BQ96DA2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB39BQ96DA2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 AC019069.1-201ENST00000610008 1333 ntBASIC19.29■□□□□ 0.68
RAB39BQ96DA2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 AL136116.3-201ENST00000402907 1138 ntBASIC19.29■□□□□ 0.68
RAB39BQ96DA2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 AC068473.5-201ENST00000616428 2072 ntBASIC19.29■□□□□ 0.68
RAB39BQ96DA2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB39BQ96DA2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB39BQ96DA2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB39BQ96DA2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB39BQ96DA2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 AC138932.3-201ENST00000567634 1902 ntBASIC19.25■□□□□ 0.67
RAB39BQ96DA2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB39BQ96DA2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 AC004448.1-201ENST00000458332 883 ntBASIC19.24■□□□□ 0.67
RAB39BQ96DA2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB39BQ96DA2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 AL139125.2-201ENST00000623134 1869 ntBASIC19.23■□□□□ 0.67
RAB39BQ96DA2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB39BQ96DA2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms