Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTHRC1Q96CG8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTHRC1Q96CG8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTHRC1Q96CG8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CTHRC1Q96CG8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTHRC1Q96CG8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTHRC1Q96CG8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 MIR6724-1-201ENST00000616420 92 ntBASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 MIR6724-2-201ENST00000616483 92 ntBASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 MIR6724-4-201ENST00000617390 92 ntBASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 MIR6724-3-201ENST00000622482 92 ntBASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CTHRC1Q96CG8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.11■□□□□ 0.97
CTHRC1Q96CG8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTHRC1Q96CG8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTHRC1Q96CG8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.08■□□□□ 0.97
CTHRC1Q96CG8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 ANOS2P-203ENST00000472227 1816 ntBASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTHRC1Q96CG8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 AC092068.2-201ENST00000590491 1708 ntBASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.07■□□□□ 0.96
CTHRC1Q96CG8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTHRC1Q96CG8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTHRC1Q96CG8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms