Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIPK4Q8NE63 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIPK4Q8NE63 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK4Q8NE63 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
HIPK4Q8NE63 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
HIPK4Q8NE63 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HIPK4Q8NE63 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.89■■□□□ 1.1
HIPK4Q8NE63 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIPK4Q8NE63 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 KRT18P10-201ENST00000388836 1287 ntBASIC21.88■■□□□ 1.09
HIPK4Q8NE63 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
HIPK4Q8NE63 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 RAP2CP1-202ENST00000605179 643 ntBASIC21.87■■□□□ 1.09
HIPK4Q8NE63 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIPK4Q8NE63 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK4Q8NE63 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK4Q8NE63 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK4Q8NE63 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.86■■□□□ 1.09
HIPK4Q8NE63 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIPK4Q8NE63 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIPK4Q8NE63 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HIPK4Q8NE63 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 DUSP8P3-201ENST00000399571 1760 ntBASIC21.83■■□□□ 1.09
HIPK4Q8NE63 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HIPK4Q8NE63 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIPK4Q8NE63 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
HIPK4Q8NE63 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HIPK4Q8NE63 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms