Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC9BQ8N6N2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.96■■□□□ 1.43
TTC9BQ8N6N2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
TTC9BQ8N6N2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
TTC9BQ8N6N2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 DUX4L19-201ENST00000557448 1267 ntBASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 MIR4767-201ENST00000582827 78 ntBASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TTC9BQ8N6N2 EDA-201ENST00000338901 1233 ntBASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 AF213884.3-201ENST00000563833 479 ntBASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TTC9BQ8N6N2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 AP001330.3-201ENST00000520123 633 ntBASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 AL355001.2-201ENST00000620617 1191 ntBASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TTC9BQ8N6N2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.92■■□□□ 1.42
TTC9BQ8N6N2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 AC092171.4-201ENST00000609130 632 ntBASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 AL136967.2-201ENST00000623968 743 ntBASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.91■■□□□ 1.42
TTC9BQ8N6N2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TTC9BQ8N6N2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC9BQ8N6N2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC9BQ8N6N2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.9■■□□□ 1.42
TTC9BQ8N6N2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TTC9BQ8N6N2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TTC9BQ8N6N2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC9BQ8N6N2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TTC9BQ8N6N2 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.89■■□□□ 1.41
TTC9BQ8N6N2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC9BQ8N6N2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TTC9BQ8N6N2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC9BQ8N6N2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 MIR939-201ENST00000401314 82 ntBASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 AC009086.3-201ENST00000623486 1008 ntBASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC9BQ8N6N2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC9BQ8N6N2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TTC9BQ8N6N2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.86■■□□□ 1.41
TTC9BQ8N6N2 AC241377.3-202ENST00000626088 1088 ntBASIC23.86■■□□□ 1.41
TTC9BQ8N6N2 AC241585.3-202ENST00000628937 1088 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms