Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD1Q8N668 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
COMMD1Q8N668 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COMMD1Q8N668 LINC00526-201ENST00000581067 1875 ntBASIC18.69■□□□□ 0.58
COMMD1Q8N668 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD1Q8N668 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD1Q8N668 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD1Q8N668 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD1Q8N668 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD1Q8N668 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD1Q8N668 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD1Q8N668 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 PVT1_1.1-201ENST00000615125 194 ntBASIC18.67■□□□□ 0.58
COMMD1Q8N668 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD1Q8N668 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD1Q8N668 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD1Q8N668 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD1Q8N668 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
COMMD1Q8N668 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD1Q8N668 KRT8P33-201ENST00000508125 1423 ntBASIC18.66■□□□□ 0.58
COMMD1Q8N668 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD1Q8N668 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD1Q8N668 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COMMD1Q8N668 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD1Q8N668 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.66■□□□□ 0.58
COMMD1Q8N668 SLC6A10P-202ENST00000431994 2058 ntBASIC18.65■□□□□ 0.58
COMMD1Q8N668 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD1Q8N668 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD1Q8N668 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COMMD1Q8N668 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
COMMD1Q8N668 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD1Q8N668 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD1Q8N668 AC103834.1-201ENST00000520383 144 ntBASIC18.65■□□□□ 0.58
COMMD1Q8N668 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD1Q8N668 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD1Q8N668 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD1Q8N668 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
COMMD1Q8N668 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COMMD1Q8N668 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COMMD1Q8N668 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
COMMD1Q8N668 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD1Q8N668 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD1Q8N668 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.64■□□□□ 0.57
COMMD1Q8N668 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD1Q8N668 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD1Q8N668 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD1Q8N668 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD1Q8N668 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD1Q8N668 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.63■□□□□ 0.57
COMMD1Q8N668 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD1Q8N668 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 AL031848.2-201ENST00000607670 837 ntBASIC18.62■□□□□ 0.57
COMMD1Q8N668 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD1Q8N668 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD1Q8N668 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD1Q8N668 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD1Q8N668 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD1Q8N668 AL592295.1-201ENST00000400984 884 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms