Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF561Q8N587 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF561Q8N587 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.18■□□□□ 0.66
ZNF561Q8N587 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.18■□□□□ 0.66
ZNF561Q8N587 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF561Q8N587 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF561Q8N587 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF561Q8N587 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF561Q8N587 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF561Q8N587 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF561Q8N587 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF561Q8N587 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF561Q8N587 AC004812.2-201ENST00000611079 2094 ntBASIC19.17■□□□□ 0.66
ZNF561Q8N587 Z92544.1-202ENST00000571933 1220 ntBASIC19.17■□□□□ 0.66
ZNF561Q8N587 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF561Q8N587 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF561Q8N587 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
ZNF561Q8N587 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF561Q8N587 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF561Q8N587 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF561Q8N587 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF561Q8N587 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF561Q8N587 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF561Q8N587 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF561Q8N587 KRT125P-201ENST00000546827 989 ntBASIC19.15■□□□□ 0.66
ZNF561Q8N587 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF561Q8N587 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ZNF561Q8N587 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 AC021242.3-201ENST00000607598 1377 ntBASIC19.15■□□□□ 0.66
ZNF561Q8N587 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
ZNF561Q8N587 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF561Q8N587 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.14■□□□□ 0.66
ZNF561Q8N587 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF561Q8N587 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF561Q8N587 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 AC004448.1-201ENST00000458332 883 ntBASIC19.14■□□□□ 0.65
ZNF561Q8N587 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF561Q8N587 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF561Q8N587 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF561Q8N587 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 AC009299.2-201ENST00000482477 511 ntBASIC19.13■□□□□ 0.65
ZNF561Q8N587 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 AL451085.2-201ENST00000605085 799 ntBASIC19.13■□□□□ 0.65
ZNF561Q8N587 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF561Q8N587 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF561Q8N587 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF561Q8N587 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZNF561Q8N587 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF561Q8N587 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ZNF561Q8N587 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF561Q8N587 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF561Q8N587 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ZNF561Q8N587 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF561Q8N587 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF561Q8N587 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF561Q8N587 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF561Q8N587 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF561Q8N587 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms