Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.73■■□□□ 1.07
COL27A1Q8IZC6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL27A1Q8IZC6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL27A1Q8IZC6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL27A1Q8IZC6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.71■■□□□ 1.07
COL27A1Q8IZC6 AC012414.1-201ENST00000556676 535 ntBASIC21.71■■□□□ 1.07
COL27A1Q8IZC6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.7■■□□□ 1.07
COL27A1Q8IZC6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL27A1Q8IZC6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.69■■□□□ 1.06
COL27A1Q8IZC6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 RARRES2P11-201ENST00000635158 484 ntBASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.68■■□□□ 1.06
COL27A1Q8IZC6 TSPY26P-201ENST00000476365 1326 ntBASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL27A1Q8IZC6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 AC091060.1-201ENST00000623524 1766 ntBASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL27A1Q8IZC6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 YBX1P1-201ENST00000445822 960 ntBASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL27A1Q8IZC6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL27A1Q8IZC6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL27A1Q8IZC6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.64■■□□□ 1.06
COL27A1Q8IZC6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 IGHV3-19-201ENST00000521488 291 ntBASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 AC126544.1-201ENST00000580842 1059 ntBASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL27A1Q8IZC6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL27A1Q8IZC6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
COL27A1Q8IZC6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms