Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.41■■□□□ 1.18
CPNE9Q8IYJ1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE9Q8IYJ1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CPNE9Q8IYJ1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CPNE9Q8IYJ1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CPNE9Q8IYJ1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CPNE9Q8IYJ1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 SNX5-217ENST00000606557 1087 ntBASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.39■■□□□ 1.17
CPNE9Q8IYJ1 DUSP8P5-201ENST00000422884 1815 ntBASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE9Q8IYJ1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 BX664725.1-201ENST00000438252 379 ntBASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 AC021242.3-201ENST00000607598 1377 ntBASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE9Q8IYJ1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 ANOS2P-203ENST00000472227 1816 ntBASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.36■■□□□ 1.17
CPNE9Q8IYJ1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE9Q8IYJ1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.35■■□□□ 1.17
CPNE9Q8IYJ1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CPNE9Q8IYJ1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CPNE9Q8IYJ1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CPNE9Q8IYJ1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE9Q8IYJ1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 AL451085.2-201ENST00000605085 799 ntBASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.33■■□□□ 1.17
CPNE9Q8IYJ1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPNE9Q8IYJ1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms