Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC146Q8IYE0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CCDC146Q8IYE0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC146Q8IYE0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CCDC146Q8IYE0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
CCDC146Q8IYE0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
CCDC146Q8IYE0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.13■■■□□ 2.41
CCDC146Q8IYE0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC146Q8IYE0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC146Q8IYE0 AC005703.6-201ENST00000623265 1329 ntBASIC30.13■■■□□ 2.41
CCDC146Q8IYE0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 AL117332.1-201ENST00000622628 974 ntBASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC146Q8IYE0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CCDC146Q8IYE0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC146Q8IYE0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
CCDC146Q8IYE0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 AC131212.1-201ENST00000613771 668 ntBASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CCDC146Q8IYE0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CCDC146Q8IYE0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC146Q8IYE0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC146Q8IYE0 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC146Q8IYE0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC146Q8IYE0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC146Q8IYE0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC146Q8IYE0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms