Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CRLF3Q8IUI8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 LINC00565-201ENST00000562710 2331 ntBASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 MIR6765-201ENST00000614092 87 ntBASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
CRLF3Q8IUI8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 AC018755.3-202ENST00000596210 929 ntBASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 C1orf229-201ENST00000623686 2258 ntBASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CRLF3Q8IUI8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CRLF3Q8IUI8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CRLF3Q8IUI8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CRLF3Q8IUI8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CRLF3Q8IUI8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 BHLHE23-202ENST00000612929 1109 ntBASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CRLF3Q8IUI8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 PKD1P6-201ENST00000343738 4769 ntBASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 RARRES2P1-201ENST00000474487 481 ntBASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CRLF3Q8IUI8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CRLF3Q8IUI8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 LINC00526-201ENST00000581067 1875 ntBASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 AC139795.1-202ENST00000500444 432 ntBASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CRLF3Q8IUI8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
CRLF3Q8IUI8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.45■■□□□ 1.19
CRLF3Q8IUI8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.45■■□□□ 1.19
CRLF3Q8IUI8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CRLF3Q8IUI8 GUSBP5-202ENST00000510805 1989 ntBASIC22.45■■□□□ 1.18
CRLF3Q8IUI8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CRLF3Q8IUI8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms