Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.411e-12■■■■□ 25.3
LARP4Q71RC2 GOLGA8A-203ENST00000473125 6233 ntTSL 1 (best)10.4□□□□□ -0.751e-15■■■■□ 25.3
LARP4Q71RC2 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.811e-15■■■■□ 25.3
LARP4Q71RC2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.12■□□□□ 0.172e-6■■■■□ 25.3
LARP4Q71RC2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.43■□□□□ 0.062e-6■■■■□ 25.3
LARP4Q71RC2 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC11.99□□□□□ -0.492e-6■■■■□ 25.3
LARP4Q71RC2 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.542e-6■■■■□ 25.3
LARP4Q71RC2 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.542e-6■■■■□ 25.3
LARP4Q71RC2 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC11.65□□□□□ -0.542e-6■■■■□ 25.3
LARP4Q71RC2 AC009779.3-201ENST00000551946 1024 ntTSL 211.04□□□□□ -0.642e-6■■■■□ 25.3
LARP4Q71RC2 AC009779.3-203ENST00000257899 745 ntTSL 510.32□□□□□ -0.762e-6■■■■□ 25.3
LARP4Q71RC2 BLOC1S1-206ENST00000553100 421 ntTSL 29.02□□□□□ -0.972e-6■■■■□ 25.3
LARP4Q71RC2 RPL39-202ENST00000468844 1915 ntTSL 1 (best)16.78■□□□□ 0.281e-9■■■■□ 25.2
LARP4Q71RC2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.431e-9■■■■□ 25.2
LARP4Q71RC2 CALR-203ENST00000586803 667 ntTSL 212.16□□□□□ -0.461e-45■■■■□ 25.2
LARP4Q71RC2 LAMB2-205ENST00000467506 689 ntTSL 212.33□□□□□ -0.443e-12■■■■□ 25.2
LARP4Q71RC2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.37□□□□□ -0.272e-7■■■■□ 25.2
LARP4Q71RC2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.053e-13■■■■□ 25.1
LARP4Q71RC2 ATP5G3-205ENST00000497075 1313 ntTSL 212.27□□□□□ -0.453e-13■■■■□ 25.1
LARP4Q71RC2 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.893e-13■■■■□ 25.1
LARP4Q71RC2 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.913e-13■■■■□ 25.1
LARP4Q71RC2 CAPN15-207ENST00000568988 911 ntTSL 324.74■■□□□ 1.557e-9■■■■□ 25.1
LARP4Q71RC2 CAPN15-202ENST00000562370 942 ntTSL 224.74■■□□□ 1.557e-9■■■■□ 25.1
LARP4Q71RC2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.68■□□□□ 0.93e-6■■■■□ 25.1
LARP4Q71RC2 CAPN15-208ENST00000637507 1482 ntTSL 520.62■□□□□ 0.897e-9■■■■□ 25.1
LARP4Q71RC2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.35■□□□□ 0.693e-6■■■■□ 25.1
LARP4Q71RC2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.523e-6■■■■□ 25.1
LARP4Q71RC2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.453e-6■■■■□ 25.1
LARP4Q71RC2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.337e-9■■■■□ 25.1
LARP4Q71RC2 TMC6-224ENST00000593044 3070 ntTSL 215.92■□□□□ 0.141e-7■■■■□ 25.1
LARP4Q71RC2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.53■□□□□ 0.084e-19■■■■□ 25.1
LARP4Q71RC2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.023e-6■■■■□ 25.1
LARP4Q71RC2 TMC6-222ENST00000592076 693 ntTSL 314.89□□□□□ -0.033e-6■■■■□ 25.1
LARP4Q71RC2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.45□□□□□ -0.17e-9■■■■□ 25.1
LARP4Q71RC2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.12□□□□□ -0.157e-9■■■■□ 25.1
LARP4Q71RC2 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.417e-9■■■■□ 25.1
LARP4Q71RC2 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.527e-9■■■■□ 25.1
LARP4Q71RC2 CEP83-207ENST00000547232 2166 ntTSL 1 (best)11.69□□□□□ -0.547e-9■■■■□ 25.1
LARP4Q71RC2 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.567e-9■■■■□ 25.1
LARP4Q71RC2 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.692e-6■■■■□ 25.1
LARP4Q71RC2 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.813e-6■■■■□ 25.1
LARP4Q71RC2 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -12e-6■■■■□ 25.1
LARP4Q71RC2 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.017e-9■■■■□ 25.1
LARP4Q71RC2 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.157e-9■■■■□ 25.1
LARP4Q71RC2 ZNF518A-208ENST00000563195 1594 ntTSL 37.04□□□□□ -1.287e-9■■■■□ 25.1
LARP4Q71RC2 AC087380.1-201ENST00000420465 1001 ntTSL 36.87□□□□□ -1.315e-6■■■■□ 25.1
LARP4Q71RC2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.47e-9■■■■□ 25.1
LARP4Q71RC2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.467e-9■■■■□ 25.1
LARP4Q71RC2 NFE2L2-209ENST00000458603 455 ntTSL 35.74□□□□□ -1.497e-9■■■■□ 25.1
LARP4Q71RC2 ZNF518A-202ENST00000442635 300 ntTSL 55.48□□□□□ -1.537e-9■■■■□ 25.1
LARP4Q71RC2 TEX15-202ENST00000518257 577 ntTSL 45.04□□□□□ -1.63e-6■■■■□ 25.1
LARP4Q71RC2 DNAJC9-203ENST00000469143 362 ntTSL 34.84□□□□□ -1.635e-6■■■■□ 25.1
LARP4Q71RC2 ZNF518A-203ENST00000478086 1579 ntTSL 1 (best)4.68□□□□□ -1.667e-9■■■■□ 25.1
LARP4Q71RC2 CEP83-214ENST00000552632 705 ntTSL 34.33□□□□□ -1.727e-9■■■■□ 25.1
LARP4Q71RC2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.24□□□□□ -1.737e-9■■■■□ 25.1
LARP4Q71RC2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.153e-6■■■■□ 25.1
LARP4Q71RC2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.237e-9■■■■□ 25.1
LARP4Q71RC2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.327e-9■■■■□ 25.1
LARP4Q71RC2 ZNF518A-206ENST00000534948 8270 ntTSL 1 (best)0.34□□□□□ -2.367e-9■■■■□ 25.1
LARP4Q71RC2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.782e-6■■■■□ 25.1
LARP4Q71RC2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.632e-6■■■■□ 25.1
LARP4Q71RC2 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC13.36□□□□□ -0.272e-6■■■■□ 25.1
LARP4Q71RC2 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC7.82□□□□□ -1.162e-6■■■■□ 25.1
LARP4Q71RC2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.861e-6■■■■□ 25.1
LARP4Q71RC2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.71e-6■■■■□ 25.1
LARP4Q71RC2 PMF1-205ENST00000497069 837 ntTSL 314.86□□□□□ -0.031e-6■■■■□ 25.1
LARP4Q71RC2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.71e-12■■■■□ 25.1
LARP4Q71RC2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.59■□□□□ 0.411e-12■■■■□ 25.1
LARP4Q71RC2 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.571e-12■■■■□ 25.1
LARP4Q71RC2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.671e-6■■■■□ 25
LARP4Q71RC2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.661e-6■■■■□ 25
LARP4Q71RC2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.661e-6■■■■□ 25
LARP4Q71RC2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.14■□□□□ 0.651e-6■■■■□ 25
LARP4Q71RC2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.621e-6■■■■□ 25
LARP4Q71RC2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.6■□□□□ 0.571e-6■■■■□ 25
LARP4Q71RC2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.471e-6■■■■□ 25
LARP4Q71RC2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.011e-6■■■■□ 25
LARP4Q71RC2 TMEM9-211ENST00000497582 1075 ntTSL 320.51■□□□□ 0.874e-9■■■■□ 25
LARP4Q71RC2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.524e-9■■■■□ 25
LARP4Q71RC2 KNL1-212ENST00000534204 565 ntTSL 410.55□□□□□ -0.726e-7■■■■□ 24.9
LARP4Q71RC2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.36e-7■■■■□ 24.9
LARP4Q71RC2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.916e-7■■■■□ 24.9
LARP4Q71RC2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.076e-7■■■■□ 24.9
LARP4Q71RC2 KNL1-211ENST00000533001 5923 ntTSL 1 (best)1.38□□□□□ -2.196e-7■■■■□ 24.9
LARP4Q71RC2 RPS29-204ENST00000554075 826 ntTSL 1 (best)8.08□□□□□ -1.123e-31■■■■□ 24.9
LARP4Q71RC2 RPS29-205ENST00000556230 624 ntTSL 1 (best)7.12□□□□□ -1.273e-31■■■■□ 24.9
LARP4Q71RC2 NDUFA2-202ENST00000502960 721 ntTSL 216.08■□□□□ 0.162e-7■■■■□ 24.9
LARP4Q71RC2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.122e-7■■■■□ 24.9
LARP4Q71RC2 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC11.14□□□□□ -0.632e-7■■■■□ 24.9
LARP4Q71RC2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.87■□□□□ 0.136e-7■■■■□ 24.9
LARP4Q71RC2 DNAH14-218ENST00000498360 951 ntTSL 313.01□□□□□ -0.336e-7■■■■□ 24.9
LARP4Q71RC2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.12■□□□□ 0.171e-9■■■■□ 24.9
LARP4Q71RC2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.991e-6■■■■□ 24.9
LARP4Q71RC2 HSPBP1-204ENST00000585927 666 ntTSL 523.71■■□□□ 1.391e-6■■■■□ 24.9
LARP4Q71RC2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.54■■□□□ 1.361e-6■■■■□ 24.9
LARP4Q71RC2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.271e-6■■■■□ 24.9
LARP4Q71RC2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.251e-6■■■■□ 24.9
LARP4Q71RC2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.221e-6■■■■□ 24.9
LARP4Q71RC2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.991e-6■■■■□ 24.9
LARP4Q71RC2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.89■□□□□ 0.931e-6■■■■□ 24.9
Retrieved 100 of 15,922 protein–RNA pairs in 439.3 ms