RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 DCAF8L2P0C7V8 631 aa5.76□□□□□ -1.49
KNL1-202ENST00000399668 NISCHQ9Y2I1 1504 aa5.6□□□□□ -1.51
KNL1-202ENST00000399668 SUPT5HO00267 1087 aaKnown RBP5.46□□□□□ -1.53
KNL1-202ENST00000399668 SHROOM4Q9ULL8 1493 aa5.45□□□□□ -1.54
KNL1-202ENST00000399668 EHMT2Q96KQ7 1210 aa5.36□□□□□ -1.55
KNL1-202ENST00000399668 FAM9AQ8IZU1 332 aaPredicted RBP5.16□□□□□ -1.58
KNL1-202ENST00000399668 TTBK1Q5TCY1 1321 aaPredicted RBP5.16□□□□□ -1.58
KNL1-202ENST00000399668 PCGF6Q9BYE7 350 aa5.13□□□□□ -1.59
KNL1-202ENST00000399668 RANGAP1P46060 587 aaPredicted RBP5.09□□□□□ -1.59
KNL1-202ENST00000399668 APLP2Q06481 763 aa5.08□□□□□ -1.6
KNL1-202ENST00000399668 TRIM41Q8WV44 630 aa5.03□□□□□ -1.6
KNL1-202ENST00000399668 ATP1B4Q9UN42 357 aaPredicted RBP5.02□□□□□ -1.61
KNL1-202ENST00000399668 PPARGC1BQ86YN6 1023 aaKnown RBP5.01□□□□□ -1.61
KNL1-202ENST00000399668 CCER1Q8TC90 406 aaPredicted RBP5□□□□□ -1.61
KNL1-202ENST00000399668 UBTFP17480 764 aaKnown RBP4.98□□□□□ -1.61
KNL1-202ENST00000399668 PELP1Q8IZL8 1130 aaKnown RBP4.98□□□□□ -1.61
KNL1-202ENST00000399668 LOC105371045A0A1W2PR82 267 aa4.92□□□□□ -1.62
KNL1-202ENST00000399668 ZEB1P37275 1124 aaPredicted RBP4.9□□□□□ -1.63
KNL1-202ENST00000399668 YTHDC1Q96MU7 727 aaKnown RBP4.89□□□□□ -1.63
KNL1-202ENST00000399668 CENPBP07199 599 aaPredicted RBP4.89□□□□□ -1.63
KNL1-202ENST00000399668 ITGAEP38570 1179 aa4.86□□□□□ -1.63
KNL1-202ENST00000399668 TRIM26Q12899 539 aaPredicted RBP4.86□□□□□ -1.63
KNL1-202ENST00000399668 ERICH6Q7L0X2 663 aa4.83□□□□□ -1.64
KNL1-202ENST00000399668 ABCC9O60706 1549 aa4.82□□□□□ -1.64
KNL1-202ENST00000399668 CHIC1Q5VXU3 224 aa4.81□□□□□ -1.64
KNL1-202ENST00000399668 HNRNPUL2Q1KMD3 747 aaKnown RBP4.8□□□□□ -1.64
KNL1-202ENST00000399668 CNGB1Q14028 1251 aaPredicted RBP4.8□□□□□ -1.64
KNL1-202ENST00000399668 HRCP23327 699 aa4.79□□□□□ -1.64
KNL1-202ENST00000399668 POLR3GLQ9BT43 218 aa4.79□□□□□ -1.64
KNL1-202ENST00000399668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.79□□□□□ -1.64
KNL1-202ENST00000399668 NEFLP07196 543 aa4.79□□□□□ -1.64
KNL1-202ENST00000399668 KAT6BQ8WYB5 2073 aa4.78□□□□□ -1.64
KNL1-202ENST00000399668 SCRIBQ14160 1630 aa4.78□□□□□ -1.64
KNL1-202ENST00000399668 PABPN1Q86U42 306 aaKnown RBP eCLIP4.77□□□□□ -1.65
KNL1-202ENST00000399668 MYT1LQ9UL68 1186 aa4.77□□□□□ -1.65
KNL1-202ENST00000399668 CCDC180Q9P1Z9 1646 aa4.75□□□□□ -1.65
KNL1-202ENST00000399668 FAM50AQ14320 339 aaKnown RBP4.71□□□□□ -1.65
KNL1-202ENST00000399668 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.65
KNL1-202ENST00000399668 SLC4A1APQ9BWU0 796 aaKnown RBP4.7□□□□□ -1.66
KNL1-202ENST00000399668 NEUROD1Q13562 356 aa4.69□□□□□ -1.66
KNL1-202ENST00000399668 DAXXQ9UER7 740 aaPredicted RBP4.65□□□□□ -1.66
KNL1-202ENST00000399668 MYT1Q01538 1121 aa4.64□□□□□ -1.67
KNL1-202ENST00000399668 TRIM52Q96A61 297 aa4.64□□□□□ -1.67
KNL1-202ENST00000399668 FBLN2P98095 1184 aa4.64□□□□□ -1.67
KNL1-202ENST00000399668 P3H3Q8IVL6 736 aa4.64□□□□□ -1.67
KNL1-202ENST00000399668 ARID3CA6NKF2 412 aa4.62□□□□□ -1.67
KNL1-202ENST00000399668 ZNF326Q5BKZ1 582 aaKnown RBP4.61□□□□□ -1.67
KNL1-202ENST00000399668 ZCCHC6Q5VYS8 1495 aaKnown RBP4.6□□□□□ -1.67
KNL1-202ENST00000399668 GTF3C3Q9Y5Q9 886 aa4.6□□□□□ -1.67
KNL1-202ENST00000399668 BCANQ96GW7 911 aa4.6□□□□□ -1.67
KNL1-202ENST00000399668 CLSPNQ9HAW4 1339 aa4.59□□□□□ -1.67
KNL1-202ENST00000399668 ANP32CO43423 234 aa4.57□□□□□ -1.68
KNL1-202ENST00000399668 BCL11AQ9H165 835 aa4.57□□□□□ -1.68
KNL1-202ENST00000399668 CFAP65Q6ZU64 1925 aaKnown RBP4.57□□□□□ -1.68
KNL1-202ENST00000399668 ZNF316A6NFI3 1004 aaPredicted RBP4.56□□□□□ -1.68
KNL1-202ENST00000399668 MYO15BQ96JP2 1530 aa4.56□□□□□ -1.68
KNL1-202ENST00000399668 CSRNP3Q8WYN3 585 aa4.55□□□□□ -1.68
KNL1-202ENST00000399668 SLC24A1O60721 1099 aa4.55□□□□□ -1.68
KNL1-202ENST00000399668 RB1CC1Q8TDY2 1594 aa4.54□□□□□ -1.68
KNL1-202ENST00000399668 ZNF777Q9ULD5 760 aaPredicted RBP4.54□□□□□ -1.68
KNL1-202ENST00000399668 DCAF1Q9Y4B6 1507 aa4.52□□□□□ -1.69
KNL1-202ENST00000399668 SETD1BQ9UPS6 1966 aaKnown RBP4.52□□□□□ -1.69
KNL1-202ENST00000399668 CDK11AQ9UQ88 783 aaPredicted RBP4.51□□□□□ -1.69
KNL1-202ENST00000399668 RTL5Q5HYW3 569 aaPredicted RBP4.51□□□□□ -1.69
KNL1-202ENST00000399668 WIZO95785 1651 aa4.51□□□□□ -1.69
KNL1-202ENST00000399668 DDX10Q13206 875 aaKnown RBP4.5□□□□□ -1.69
KNL1-202ENST00000399668 SALL2Q9Y467 1007 aaPredicted RBP4.5□□□□□ -1.69
KNL1-202ENST00000399668 PLPPR3Q6T4P5 718 aa4.49□□□□□ -1.69
KNL1-202ENST00000399668 HIRIP3Q9BW71 556 aaPredicted RBP4.49□□□□□ -1.69
KNL1-202ENST00000399668 NACADO15069 1562 aa4.49□□□□□ -1.69
KNL1-202ENST00000399668 ACIN1Q9UKV3 1341 aaKnown RBP4.49□□□□□ -1.69
KNL1-202ENST00000399668 CHIC2Q9UKJ5 165 aa4.48□□□□□ -1.69
KNL1-202ENST00000399668 CANXP27824 592 aaKnown RBP4.48□□□□□ -1.69
KNL1-202ENST00000399668 TONSLQ96HA7 1378 aa4.48□□□□□ -1.69
KNL1-202ENST00000399668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.47□□□□□ -1.694e-7■■□□□ 14.2
KNL1-202ENST00000399668 FAM9BQ8IZU0 186 aa4.47□□□□□ -1.69
KNL1-202ENST00000399668 FKBP8Q14318 412 aa4.47□□□□□ -1.69
KNL1-202ENST00000399668 ZBTB47Q9UFB7 747 aaPredicted RBP4.47□□□□□ -1.69
KNL1-202ENST00000399668 CHGAP10645 457 aaKnown RBP4.46□□□□□ -1.69
KNL1-202ENST00000399668 SENP3Q9H4L4 574 aaPredicted RBP4.46□□□□□ -1.69
KNL1-202ENST00000399668 HNRNPUQ00839 825 aaKnown RBP eCLIP4.46□□□□□ -1.7
KNL1-202ENST00000399668 KDM2AQ9Y2K7 1162 aa4.46□□□□□ -1.7
KNL1-202ENST00000399668 NPM2Q86SE8 214 aaKnown RBP4.46□□□□□ -1.7
KNL1-202ENST00000399668 ABCC8Q09428 1581 aa4.45□□□□□ -1.7
KNL1-202ENST00000399668 NEFMP07197 916 aa4.44□□□□□ -1.7
KNL1-202ENST00000399668 TMC1Q8TDI8 760 aa4.44□□□□□ -1.7
KNL1-202ENST00000399668 STAG3Q9UJ98 1225 aa4.44□□□□□ -1.7
KNL1-202ENST00000399668 MTUS2Q5JR59 1369 aa4.44□□□□□ -1.7
KNL1-202ENST00000399668 BAZ1BQ9UIG0 1483 aaKnown RBP4.43□□□□□ -1.7
KNL1-202ENST00000399668 RSF1Q96T23 1441 aaPredicted RBP4.43□□□□□ -1.7
KNL1-202ENST00000399668 PRDM2Q13029 1718 aa4.43□□□□□ -1.7
KNL1-202ENST00000399668 MIER1Q8N108 512 aa4.43□□□□□ -1.7
KNL1-202ENST00000399668 CLIP1P30622 1438 aa4.43□□□□□ -1.7
KNL1-202ENST00000399668 IRX6P78412 446 aaPredicted RBP4.43□□□□□ -1.7
KNL1-202ENST00000399668 ANP32AP39687 249 aaKnown RBP4.42□□□□□ -1.7
KNL1-202ENST00000399668 UNC13AQ9UPW8 1703 aa4.42□□□□□ -1.7
KNL1-202ENST00000399668 SENP3-EIF4A1A0A087X0R7 540 aa4.42□□□□□ -1.7
KNL1-202ENST00000399668 RRP7BPQ9NSQ0 103 aa4.42□□□□□ -1.7
KNL1-202ENST00000399668 CEP162Q5TB80 1403 aa4.42□□□□□ -1.7
KNL1-202ENST00000399668 CHMP7Q8WUX9 453 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms