Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MRPL54Q6P161 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MRPL54Q6P161 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.1■□□□□ 0.33
MRPL54Q6P161 MIR219A2-201ENST00000608502 1504 ntBASIC17.1■□□□□ 0.33
MRPL54Q6P161 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MRPL54Q6P161 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.1■□□□□ 0.33
MRPL54Q6P161 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 AC092068.2-201ENST00000590491 1708 ntBASIC17.1■□□□□ 0.33
MRPL54Q6P161 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRPL54Q6P161 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPL54Q6P161 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MRPL54Q6P161 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MRPL54Q6P161 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.09■□□□□ 0.33
MRPL54Q6P161 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MRPL54Q6P161 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MRPL54Q6P161 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPL54Q6P161 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPL54Q6P161 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MRPL54Q6P161 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MRPL54Q6P161 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
MRPL54Q6P161 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPL54Q6P161 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.08■□□□□ 0.32
MRPL54Q6P161 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MRPL54Q6P161 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.08■□□□□ 0.32
MRPL54Q6P161 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MRPL54Q6P161 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MRPL54Q6P161 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.06■□□□□ 0.32
MRPL54Q6P161 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.06■□□□□ 0.32
MRPL54Q6P161 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MRPL54Q6P161 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MRPL54Q6P161 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.05■□□□□ 0.32
MRPL54Q6P161 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.05■□□□□ 0.32
MRPL54Q6P161 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.05■□□□□ 0.32
MRPL54Q6P161 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRPL54Q6P161 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 AC242852.2-201ENST00000615738 1807 ntBASIC17.04■□□□□ 0.32
MRPL54Q6P161 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
MRPL54Q6P161 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRPL54Q6P161 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL54Q6P161 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms