Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H2AA3Q6FI13 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.85■■□□□ 1.09
HIST2H2AA3Q6FI13 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H2AA3Q6FI13 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST2H2AA3Q6FI13 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST2H2AA3Q6FI13 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.83■■□□□ 1.09
HIST2H2AA3Q6FI13 AC239859.2-201ENST00000444165 318 ntBASIC21.83■■□□□ 1.09
HIST2H2AA3Q6FI13 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
HIST2H2AA3Q6FI13 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H2AA3Q6FI13 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H2AA3Q6FI13 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H2AA3Q6FI13 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H2AA3Q6FI13 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 AC009299.2-201ENST00000482477 511 ntBASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 MIR4787-201ENST00000607364 84 ntBASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 AC092028.1-203ENST00000608262 953 ntBASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 MIR6722-201ENST00000617286 78 ntBASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H2AA3Q6FI13 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 AL451085.2-201ENST00000605085 799 ntBASIC21.81■■□□□ 1.08
HIST2H2AA3Q6FI13 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H2AA3Q6FI13 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 DUSP8P5-201ENST00000422884 1815 ntBASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST2H2AA3Q6FI13 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 ANOS2P-203ENST00000472227 1816 ntBASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 AC005703.6-201ENST00000623265 1329 ntBASIC21.78■■□□□ 1.08
HIST2H2AA3Q6FI13 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.77■■□□□ 1.08
HIST2H2AA3Q6FI13 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms