Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATPAF1Q5TC12 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
ATPAF1Q5TC12 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 EP400NL-214ENST00000641289 2402 ntBASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 AC233723.2-201ENST00000623798 2106 ntBASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.55■□□□□ 0.72
ATPAF1Q5TC12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATPAF1Q5TC12 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 LINC00565-201ENST00000562710 2331 ntBASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
ATPAF1Q5TC12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 KRT8P33-201ENST00000508125 1423 ntBASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 AC120024.1-201ENST00000562672 995 ntBASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 AC103724.3-201ENST00000564481 992 ntBASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATPAF1Q5TC12 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATPAF1Q5TC12 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 HLA-L-211ENST00000482052 1765 ntBASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 THA1P-201ENST00000590384 1145 ntBASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATPAF1Q5TC12 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 RARRES2P1-201ENST00000474487 481 ntBASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATPAF1Q5TC12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms