Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.77■■□□□ 1.07
PDCD4Q53EL6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDCD4Q53EL6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 C1orf229-201ENST00000623686 2258 ntBASIC21.76■■□□□ 1.07
PDCD4Q53EL6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.76■■□□□ 1.07
PDCD4Q53EL6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDCD4Q53EL6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.75■■□□□ 1.07
PDCD4Q53EL6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDCD4Q53EL6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDCD4Q53EL6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDCD4Q53EL6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDCD4Q53EL6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDCD4Q53EL6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PDCD4Q53EL6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PDCD4Q53EL6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDCD4Q53EL6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDCD4Q53EL6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 AC129492.7-201ENST00000622992 756 ntBASIC21.7■■□□□ 1.06
PDCD4Q53EL6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDCD4Q53EL6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDCD4Q53EL6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 EP400NL-214ENST00000641289 2402 ntBASIC21.68■■□□□ 1.06
PDCD4Q53EL6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDCD4Q53EL6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms