Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 OCA4YCR095C 1089 nt4.32□□□□□ -1.72
VPS13Q07878 NDE1YMR145C 1683 nt4.31□□□□□ -1.72
VPS13Q07878 CAT5YOR125C 702 nt4.31□□□□□ -1.72
VPS13Q07878 LAS1YKR063C 1509 nt4.31□□□□□ -1.72
VPS13Q07878 AKL1YBR059C 3327 nt4.3□□□□□ -1.72
VPS13Q07878 KAR2YJL034W 2049 nt4.3□□□□□ -1.72
VPS13Q07878 CHL4YDR254W 1377 nt4.3□□□□□ -1.72
VPS13Q07878 VMA2YBR127C 1554 nt4.3□□□□□ -1.72
VPS13Q07878 PRP2YNR011C 2631 nt4.3□□□□□ -1.72
VPS13Q07878 APC11YDL008W 498 nt4.3□□□□□ -1.72
VPS13Q07878 AAD6YFL056C 639 nt4.3□□□□□ -1.72
VPS13Q07878 GTO1YGR154C 1071 nt4.3□□□□□ -1.72
VPS13Q07878 snR10snR10 245 nt4.3□□□□□ -1.72
VPS13Q07878 PTK2YJR059W 2457 nt4.29□□□□□ -1.72
VPS13Q07878 SYG1YIL047C 2709 nt4.29□□□□□ -1.72
VPS13Q07878 ODC2YOR222W 924 nt4.29□□□□□ -1.72
VPS13Q07878 STE7YDL159W 1548 nt4.29□□□□□ -1.72
VPS13Q07878 PMA1YGL008C 2757 nt4.29□□□□□ -1.72
VPS13Q07878 EFT2YDR385W 2529 nt4.29□□□□□ -1.72
VPS13Q07878 EFT1YOR133W 2529 nt4.29□□□□□ -1.72
VPS13Q07878 PPQ1YPL179W 1650 nt4.29□□□□□ -1.72
VPS13Q07878 CSR1YLR380W 1227 nt4.29□□□□□ -1.72
VPS13Q07878 SIP5YMR140W 1470 nt4.29□□□□□ -1.72
VPS13Q07878 ENP1YBR247C 1452 nt4.29□□□□□ -1.72
VPS13Q07878 PUS5YLR165C 765 nt4.28□□□□□ -1.72
VPS13Q07878 ARC15YIL062C 465 nt4.28□□□□□ -1.72
VPS13Q07878 GSY2YLR258W 2118 nt4.28□□□□□ -1.72
VPS13Q07878 GCN20YFR009W 2259 nt4.28□□□□□ -1.72
VPS13Q07878 RMD9YGL107C 1941 nt4.28□□□□□ -1.72
VPS13Q07878 RMD1YDL001W 1293 nt4.28□□□□□ -1.72
VPS13Q07878 RPA14YDR156W 414 nt4.28□□□□□ -1.72
VPS13Q07878 KIN4YOR233W 2403 nt4.27□□□□□ -1.73
VPS13Q07878 SUL2YLR092W 2682 nt4.27□□□□□ -1.73
VPS13Q07878 LAG2YOL025W 1983 nt4.26□□□□□ -1.73
VPS13Q07878 EDC3YEL015W 1656 nt4.26□□□□□ -1.73
VPS13Q07878 UGA1YGR019W 1416 nt4.26□□□□□ -1.73
VPS13Q07878 SFK1YKL051W 1062 nt4.26□□□□□ -1.73
VPS13Q07878 ACS1YAL054C 2142 nt4.26□□□□□ -1.73
VPS13Q07878 MAK3YPR051W 531 nt4.26□□□□□ -1.73
VPS13Q07878 TOM71YHR117W 1920 nt4.26□□□□□ -1.73
VPS13Q07878 JLP1YLL057C 1239 nt4.26□□□□□ -1.73
VPS13Q07878 tQ(UUG)CtQ(UUG)C 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)D1tQ(UUG)D1 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)D2tQ(UUG)D2 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)D3tQ(UUG)D3 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)E1tQ(UUG)E1 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)HtQ(UUG)H 72 nt4.25□□□□□ -1.73
VPS13Q07878 tQ(UUG)LtQ(UUG)L 72 nt4.25□□□□□ -1.73
VPS13Q07878 PXA1YPL147W 2613 nt4.25□□□□□ -1.73
VPS13Q07878 YIL177CYIL177C 5277 nt4.25□□□□□ -1.73
VPS13Q07878 YJL225CYJL225C 5277 nt4.25□□□□□ -1.73
VPS13Q07878 MTC5YDR128W 3447 nt4.25□□□□□ -1.73
VPS13Q07878 RNR3YIL066C 2610 nt4.24□□□□□ -1.73
VPS13Q07878 YGL185CYGL185C 1140 nt4.24□□□□□ -1.73
VPS13Q07878 RIB4YOL143C 510 nt4.24□□□□□ -1.73
VPS13Q07878 LOH1YJL038C 660 nt4.24□□□□□ -1.73
VPS13Q07878 OAR1YKL055C 837 nt4.24□□□□□ -1.73
VPS13Q07878 YMR316C-AYMR316C-A 312 nt4.24□□□□□ -1.73
VPS13Q07878 KEL1YHR158C 3495 nt4.24□□□□□ -1.73
VPS13Q07878 FOL2YGR267C 732 nt4.24□□□□□ -1.73
VPS13Q07878 ASI2YNL159C 870 nt4.24□□□□□ -1.73
VPS13Q07878 NAT3YPR131C 588 nt4.24□□□□□ -1.73
VPS13Q07878 NUG1YER006W 1563 nt4.23□□□□□ -1.73
VPS13Q07878 PTC1YDL006W 846 nt4.23□□□□□ -1.73
VPS13Q07878 HOS2YGL194C 1359 nt4.23□□□□□ -1.73
VPS13Q07878 CDS1YBR029C 1374 nt4.23□□□□□ -1.73
VPS13Q07878 YIL054WYIL054W 318 nt4.23□□□□□ -1.73
VPS13Q07878 RSA4YCR072C 1548 nt4.23□□□□□ -1.73
VPS13Q07878 EAR1YMR171C 1653 nt4.22□□□□□ -1.73
VPS13Q07878 YAL047W-AYAL047W-A 330 nt4.22□□□□□ -1.73
VPS13Q07878 ABZ1YNR033W 2364 nt4.22□□□□□ -1.73
VPS13Q07878 TNA1YGR260W 1605 nt4.22□□□□□ -1.73
VPS13Q07878 CKA2YOR061W 1020 nt4.21□□□□□ -1.73
VPS13Q07878 MDL1YLR188W 2088 nt4.21□□□□□ -1.73
VPS13Q07878 ALD6YPL061W 1503 nt4.21□□□□□ -1.74
VPS13Q07878 SKG3YLR187W 3081 nt4.21□□□□□ -1.74
VPS13Q07878 YKL162C-AYKL162C-A 153 nt4.21□□□□□ -1.74
VPS13Q07878 CIT1YNR001C 1440 nt4.21□□□□□ -1.74
VPS13Q07878 NOT3YIL038C 2511 nt4.2□□□□□ -1.74
VPS13Q07878 ATG3YNR007C 933 nt4.2□□□□□ -1.74
VPS13Q07878 TRF5YNL299W 1929 nt4.2□□□□□ -1.74
VPS13Q07878 YPL245WYPL245W 1365 nt4.2□□□□□ -1.74
VPS13Q07878 CHD1YER164W 4407 nt4.2□□□□□ -1.74
VPS13Q07878 VTS1YOR359W 1572 nt4.19□□□□□ -1.74
VPS13Q07878 IRC25YLR021W 540 nt4.19□□□□□ -1.74
VPS13Q07878 URA4YLR420W 1095 nt4.19□□□□□ -1.74
VPS13Q07878 RCM1YNL022C 1473 nt4.19□□□□□ -1.74
VPS13Q07878 CHK1YBR274W 1584 nt4.19□□□□□ -1.74
VPS13Q07878 AIM3YBR108W 2844 nt4.19□□□□□ -1.74
VPS13Q07878 TKL1YPR074C 2043 nt4.19□□□□□ -1.74
VPS13Q07878 NRD1YNL251C 1728 nt4.19□□□□□ -1.74
VPS13Q07878 MTD1YKR080W 963 nt4.18□□□□□ -1.74
VPS13Q07878 MRP4YHL004W 1185 nt4.17□□□□□ -1.74
VPS13Q07878 MBB1YJL199C 327 nt4.17□□□□□ -1.74
VPS13Q07878 PSF3YOL146W 585 nt4.17□□□□□ -1.74
VPS13Q07878 FHL1YPR104C 2811 nt4.17□□□□□ -1.74
VPS13Q07878 RKM2YDR198C 1440 nt4.17□□□□□ -1.74
VPS13Q07878 OXP1YKL215C 3861 nt4.16□□□□□ -1.74
VPS13Q07878 KCC4YCL024W 3114 nt4.16□□□□□ -1.74
VPS13Q07878 RTC1YOL138C 4026 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms